[HTML][HTML] Whole-genome sequencing and social-network analysis of a tuberculosis outbreak
Background An outbreak of tuberculosis occurred over a 3-year period in a medium-size
community in British Columbia, Canada. The results of mycobacterial interspersed repetitive …
community in British Columbia, Canada. The results of mycobacterial interspersed repetitive …
Whole Genome Sequencing versus Traditional Genotyping for Investigation of a Mycobacterium tuberculosis Outbreak: A Longitudinal Molecular Epidemiological …
Background Understanding Mycobacterium tuberculosis (Mtb) transmission is essential to
guide efficient tuberculosis control strategies. Traditional strain typing lacks sufficient …
guide efficient tuberculosis control strategies. Traditional strain typing lacks sufficient …
Whole-genome sequencing to delineate Mycobacterium tuberculosis outbreaks: a retrospective observational study
TM Walker, CLC Ip, RH Harrell, JT Evans… - The Lancet infectious …, 2013 - thelancet.com
Background Tuberculosis incidence in the UK has risen in the past decade. Disease control
depends on epidemiological data, which can be difficult to obtain. Whole-genome …
depends on epidemiological data, which can be difficult to obtain. Whole-genome …
Use of Whole Genome Sequencing to Determine the Microevolution of Mycobacterium tuberculosis during an Outbreak
M Kato-Maeda, C Ho, B Passarelli, N Banaei… - PloS one, 2013 - journals.plos.org
Rationale Current tools available to study the molecular epidemiology of tuberculosis do not
provide information about the directionality and sequence of transmission for tuberculosis …
provide information about the directionality and sequence of transmission for tuberculosis …
Whole-genome sequencing to detect recent transmission of Mycobacterium tuberculosis in settings with a high burden of tuberculosis
T Luo, C Yang, Y Peng, L Lu, G Sun, J Wu, X Jin… - Tuberculosis, 2014 - Elsevier
Whole genome sequencing (WGS) of Mycobacterium tuberculosis has been used to trace
the transmission of M. tuberculosis, the causative agent of tuberculosis (TB). Previously …
the transmission of M. tuberculosis, the causative agent of tuberculosis (TB). Previously …
Tracking a tuberculosis outbreak over 21 years: strain-specific single-nucleotide polymorphism typing combined with targeted whole-genome sequencing
D Stucki, M Ballif, T Bodmer, M Coscolla… - The Journal of …, 2015 - academic.oup.com
Background. Whole-genome sequencing (WGS) is increasingly used in molecular-
epidemiological investigations of bacterial pathogens, despite cost-and time-intensive …
epidemiological investigations of bacterial pathogens, despite cost-and time-intensive …
Whole-genome sequencing to establish relapse or re-infection with Mycobacterium tuberculosis: a retrospective observational study
Background Recurrence of tuberculosis after treatment makes management difficult and is a
key factor for determining treatment efficacy. Two processes can cause recurrence: relapse …
key factor for determining treatment efficacy. Two processes can cause recurrence: relapse …
A quantitative evaluation of MIRU-VNTR typing against whole-genome sequencing for identifying Mycobacterium tuberculosis transmission: a prospective …
DH Wyllie, JA Davidson, EG Smith, P Rathod… - …, 2018 - thelancet.com
Abstract Background Mycobacterial Interspersed Repetitive Unit-Variable Number Tandem
Repeat (MIRU-VNTR) typing is widely used in high-income countries to determine …
Repeat (MIRU-VNTR) typing is widely used in high-income countries to determine …
Large-scale whole genome sequencing of M. tuberculosis provides insights into transmission in a high prevalence area
JA Guerra-Assunção, AC Crampin, R Houben… - Elife, 2015 - elifesciences.org
To improve understanding of the factors influencing tuberculosis transmission and the role of
pathogen variation, we sequenced all available specimens from patients diagnosed over 15 …
pathogen variation, we sequenced all available specimens from patients diagnosed over 15 …
Three-year population-based evaluation of standardized mycobacterial interspersed repetitive-unit-variable-number tandem-repeat typing of Mycobacterium …
C Allix-Béguec, M Fauville-Dufaux… - Journal of clinical …, 2008 - Am Soc Microbiol
Standardized mycobacterial interspersed repetitive-unit-variable-number tandem repeat
(MIRU-VNTR) typing based on 15 and 24 loci recently has been proposed for …
(MIRU-VNTR) typing based on 15 and 24 loci recently has been proposed for …
関連 キーワード
- mycobacterium tuberculosis genome sequencing
- traditional genotyping genome sequencing
- prevalence area genome sequencing
- polymorphism typing tuberculosis outbreak
- mycobacterium tuberculosis unit variable
- mycobacterium tuberculosis tandem repeat
- unit variable tandem repeat
- miru vntr quantitative evaluation
- mycobacterium tuberculosis high burden