New insights into genome folding by loop extrusion from inducible degron technologies
Chromatin folds into dynamic loops that often span hundreds of kilobases and physically
wire distant loci together for gene regulation. These loops are continuously created …
wire distant loci together for gene regulation. These loops are continuously created …
Transcriptional elongation control in developmental gene expression, aging, and disease
Y Aoi, A Shilatifard - Molecular cell, 2023 - cell.com
The elongation stage of transcription by RNA polymerase II (RNA Pol II) is central to the
regulation of gene expression in response to developmental and environmental cues in …
regulation of gene expression in response to developmental and environmental cues in …
BRD4-directed super-enhancer organization of transcription repression programs links to chemotherapeutic efficacy in breast cancer
B Liu, X Liu, L Han, X Chen, X Wu… - Proceedings of the …, 2022 - National Acad Sciences
BRD4 is well known for its role in super-enhancer organization and transcription activation
of several prominent oncogenes including c-MYC and BCL2. As such, BRD4 inhibitors are …
of several prominent oncogenes including c-MYC and BCL2. As such, BRD4 inhibitors are …
The Mediator complex regulates enhancer-promoter interactions
S Ramasamy, A Aljahani, MA Karpinska… - Nature Structural & …, 2023 - nature.com
Enhancer-mediated gene activation generally requires physical proximity between
enhancers and their target gene promoters. However, the molecular mechanisms by which …
enhancers and their target gene promoters. However, the molecular mechanisms by which …
[HTML][HTML] Chromatin jets define the properties of cohesin-driven in vivo loop extrusion
Complex genomes show intricate organization in three-dimensional (3D) nuclear space.
Current models posit that cohesin extrudes loops to form self-interacting domains delimited …
Current models posit that cohesin extrudes loops to form self-interacting domains delimited …
High-throughput Oligopaint screen identifies druggable 3D genome regulators
The human genome functions as a three-dimensional chromatin polymer, driven by a
complex collection of chromosome interactions,–. Although the molecular rules governing …
complex collection of chromosome interactions,–. Although the molecular rules governing …
YY1-controlled regulatory connectivity and transcription are influenced by the cell cycle
JC Lam, NG Aboreden, SC Midla, S Wang, A Huang… - Nature Genetics, 2024 - nature.com
Few transcription factors have been examined for their direct roles in physically connecting
enhancers and promoters. Here acute degradation of Yin Yang 1 (YY1) in erythroid cells …
enhancers and promoters. Here acute degradation of Yin Yang 1 (YY1) in erythroid cells …
High-sensitive nascent transcript sequencing reveals BRD4-specific control of widespread enhancer and target gene transcription
A Bressin, O Jasnovidova, M Arnold… - Nature …, 2023 - nature.com
Gene transcription by RNA polymerase II (Pol II) is under control of promoters and distal
regulatory elements known as enhancers. Enhancers are themselves transcribed by Pol II …
regulatory elements known as enhancers. Enhancers are themselves transcribed by Pol II …
NIPBL and cohesin: new take on a classic tale
D Alonso-Gil, A Losada - Trends in Cell Biology, 2023 - cell.com
Cohesin folds the genome in dynamic chromatin loops and holds the sister chromatids
together. NIPBL Scc2 is currently considered the cohesin loader, a role that may need …
together. NIPBL Scc2 is currently considered the cohesin loader, a role that may need …
Chromatin remodeler Activity-Dependent Neuroprotective Protein (ADNP) contributes to syndromic autism
CP D'Incal, KE Van Rossem, K De Man, A Konings… - Clinical …, 2023 - Springer
Background Individuals affected with autism often suffer additional co-morbidities such as
intellectual disability. The genes contributing to autism cluster on a relatively limited number …
intellectual disability. The genes contributing to autism cluster on a relatively limited number …