「"Fiona Brinkman"」に一致 するユーザー プロフィール
Fiona BrinkmanSimon Fraser University |
CARD 2020: antibiotic resistome surveillance with the comprehensive antibiotic resistance database
The Comprehensive Antibiotic Resistance Database (CARD; https://card.mcmaster.ca ) is a
curated resource providing reference DNA and protein sequences, detection models and …
curated resource providing reference DNA and protein sequences, detection models and …
PSORTb 3.0: improved protein subcellular localization prediction with refined localization subcategories and predictive capabilities for all prokaryotes
Motivation: PSORTb has remained the most precise bacterial protein subcellular localization
(SCL) predictor since it was first made available in 2003. However, the recall needs to be …
(SCL) predictor since it was first made available in 2003. However, the recall needs to be …
CARD 2017: expansion and model-centric curation of the comprehensive antibiotic resistance database
The Comprehensive Antibiotic Resistance Database (CARD; http://arpcard.mcmaster.ca ) is
a manually curated resource containing high quality reference data on the molecular basis …
a manually curated resource containing high quality reference data on the molecular basis …
InnateDB: systems biology of innate immunity and beyond—recent updates and continuing curation
InnateDB ( http://www.innatedb.com ) is an integrated analysis platform that has been specifically
designed to facilitate systems-level analyses of mammalian innate immunity networks, …
designed to facilitate systems-level analyses of mammalian innate immunity networks, …
The genome sequence of taurine cattle: a window to ruminant biology and evolution
Bovine Genome Sequencing and Analysis Consortium… - Science, 2009 - science.org
To understand the biology and evolution of ruminants, the cattle genome was sequenced to
about sevenfold coverage. The cattle genome contains a minimum of 22,000 genes, with a …
about sevenfold coverage. The cattle genome contains a minimum of 22,000 genes, with a …
IslandViewer 4: expanded prediction of genomic islands for larger-scale datasets
C Bertelli, MR Laird, KP Williams… - Nucleic acids …, 2017 - academic.oup.com
IslandViewer ( http://www.pathogenomics.sfu.ca/islandviewer/ ) is a widely-used webserver
for the prediction and interactive visualization of genomic islands (GIs, regions of probable …
for the prediction and interactive visualization of genomic islands (GIs, regions of probable …
Enhanced annotations and features for comparing thousands of Pseudomonas genomes in the Pseudomonas genome database
The Pseudomonas Genome Database ( http://www.pseudomonas.com ) is well known for
the application of community-based annotation approaches for producing a high-quality …
the application of community-based annotation approaches for producing a high-quality …
PSORTb v. 2.0: expanded prediction of bacterial protein subcellular localization and insights gained from comparative proteome analysis
Motivation: PSORTb v.1.1 is the most precise bacterial localization prediction tool available.
However, the program's predictive coverage and recall are low and the method is only …
However, the program's predictive coverage and recall are low and the method is only …
[HTML][HTML] Whole-genome sequencing and social-network analysis of a tuberculosis outbreak
Background An outbreak of tuberculosis occurred over a 3-year period in a medium-size
community in British Columbia, Canada. The results of mycobacterial interspersed repetitive unit…
community in British Columbia, Canada. The results of mycobacterial interspersed repetitive unit…
Modulation of the TLR-mediated inflammatory response by the endogenous human host defense peptide LL-37
N Mookherjee, KL Brown, DME Bowdish… - The Journal of …, 2006 - journals.aai.org
The sole human cathelicidin peptide, LL-37, has been demonstrated to protect animals against
endotoxemia/sepsis. Low, physiological concentrations of LL-37 (≤ 1μ g/ml) were able …
endotoxemia/sepsis. Low, physiological concentrations of LL-37 (≤ 1