(Translated by
https://www.hiragana.jp/
)
KEGG T01004: 562489
Danio rerio (zebrafish): 562489
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Entry
562489 CDS
T01004
Symbol
trim3a
Name
(RefSeq) tripartite motif-containing protein 3 isoform X2
KO
K11997
tripartite motif-containing protein 2/3
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dre04121
]
562489 (trim3a)
Ubiquitin system [BR:
dre04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
562489 (trim3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
Filamin
zf-B_box
DUF5128
zf-RING_UBOX
zf-C3HC4
SGL
zf-C3HC4_3
zf-RING_5
zf-C3HC4_2
Invasin_D3
zf-RING_2
zf-C3HC4_4
Baculo_PEP_C
ATG17_like
zf-ANAPC11
Prok-RING_4
FapA
Histidinol_dh
YtkA
Apolipoprotein
Fib_alpha
Phage_GPO
Sipho_Gp157
Muted
DUF6389
Motif
Other DBs
NCBI-GeneID:
562489
NCBI-ProteinID:
XP_021322140
ZFIN:
ZDB-GENE-080522-4
Ensembl:
ENSDARG00000063711
UniProt:
A0A8M9PLS3
LinkDB
All DBs
Position
15:32297441..32349495
Genome browser
AA seq
683 aa
AA seq
DB search
MPLTMAKRESGSTSPVVRQIDKQFLVCSICLEHYHNPKVLPCLHTFCERCLQNYIPPQSL
TLSCPVCRQTSILPEKGVAALQNNFFITNLMEVLQREQDCTRSEASSGLESAGAATYAPP
LSCPNHEGKVMEFYCESCETAMCLECTEGEHREHVTVPLRDVLEQHKAALKNQLDAIRNR
LPQLTAAIELVNEISKQLTDRKNEAVTEISNTFEELEKALHQRKTTLITDLENICSTKQK
VLQGQLAALMQGKENIQSSCSFTEQALNHGSPTEVLLVQKQMGERMGALARHAFPEQPHE
NGHLDCQVETEGLRRSIQNLGVLLTTSSVGHTSVATGEGLRHAVVGQNTTVTVTTKDKDG
ELVKTGNAALRAQISGADGGVTETDVTDNKNGTYEIGYTLRSEGEFSFSVLLYGRHVRGS
PFRLRAVKACDAPQSPDDVKRRVKSPGGGGGAGGHVRQKAVRRPSSMYSTTKKKENPIED
ELIFRVGTRGRERGEFSNLQGISTTSSGRIVVADSNNQCIQVFSNDGQFKLKFGVRGRSP
GQLQRPTGVAVDMNGDIIVADYDNRWLSIFSPDGKFKNKIGAGRLMGPKGVAVDKNGHII
TADNKACCVFIFQSNGKLVTKFGAKGTSERQFADKSAPNTPTEPKQSKSGPAFNVRLIGL
NTKVFIVFLRMSNRDFTFSSHLR
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgcctctcacgatggcgaagcgggagagcggcagcaccagtccagtggtgcgtcagatt
gacaagcagttcctggtgtgcagcatctgtctggagcactaccacaatcctaaagtcctg
ccctgcctgcataccttctgcgagagatgcctccagaactacatcccacctcagtctttg
accctgtcctgccccgtgtgccgacagacctccattctgccggagaagggtgtagcagcg
ctgcagaataatttcttcataactaatctgatggaggtgttgcagagagagcaggactgc
acccgttctgaagcatctagtgggctggagtcggctggagcggctacatacgctccgcca
ctgtcctgcccaaaccatgagggcaaggttatggagttttactgcgagtcttgtgaaaca
gccatgtgtttggagtgcactgagggggagcacagagaacatgtgaccgtcccactgcgg
gatgttctggagcaacacaaagcggcgctgaagaaccagctggatgctattcgaaacagg
cttcctcagctgacggcagccatcgagctggtgaatgagatctccaaacagcttacagac
cgcaagaatgaggccgtgacagagatcagcaacacctttgaggagctggagaaagccctg
caccagcgcaagaccaccctcatcactgacctggagaacatctgcagcaccaagcagaag
gttcttcagggtcagctggctgctctgatgcagggaaaggagaacatccaaagcagctgc
agcttcacggagcaggcgctgaaccacggtagtcccactgaagtactgctagtgcagaaa
cagatgggcgagcggatgggggctctggcccggcatgctttccctgagcagccgcatgag
aacggacacctggactgtcaggtggagaccgagggcttgcgacgctctatacagaaccta
ggcgtcctgctcaccaccagttcagtgggtcacaccagtgtggctactggagagggactc
cgacacgctgttgtaggacagaacaccactgttactgtcaccaccaaggataaagatggt
gagttggtgaagactggaaacgcagctctgcgagctcagatcagcggtgcagacggaggc
gtcactgaaacagacgtcacagacaataagaacggcacatatgagatcggctacacactg
cgcagcgagggtgagttctccttctccgtcctgctctacggaagacacgtcagaggaagc
cccttccgtctgagagccgtcaaagcctgcgacgccccgcagtcacccgatgatgtcaag
aggagagtcaagtctcctggaggaggaggaggagctggaggacatgtgcgacagaaggcg
gtccgcagaccctccagcatgtacagcaccaccaagaagaaggagaaccccatcgaggat
gagctcatcttcagagtcgggactcgtggacgagagcgtggtgaattctctaatctgcag
ggcatctccaccaccagcagtggcagaatcgtggtggcagacagtaacaaccagtgcatt
caggttttctccaatgacggtcagtttaagctaaagtttggggtcagaggtcgttctcct
ggtcagctgcagcgtcccactggagtggcagtggacatgaatggagacattattgtggcc
gattatgacaaccggtggctcagcatcttctctccagatggcaaattcaagaataaaatt
ggagcaggtcgtctgatgggtcctaaaggagtggcggttgacaaaaatggccacattatc
actgcagacaacaaggcctgctgcgtcttcatcttccagtccaacggaaagctcgtcacc
aaattcggtgccaaaggaacatcagaaaggcagtttgcagacaaaagtgctccaaataca
ccaacagagcccaaacagagcaaatctggcccagccttcaatgtaaggctcattgggctc
aacacaaaagtcttcatcgtcttcctgcgaatgagcaacagagattttacatttagcagc
catttgcgctga
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