(Translated by
https://www.hiragana.jp/
)
KEGG T08308: 118114678
Hippoglossus stenolepis (Pacific halibut): 118114678
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Entry
118114678 CDS
T08308
Symbol
grin1b
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1b
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04020
Calcium signaling pathway
hsp04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
118114678 (grin1b)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
118114678 (grin1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hsp04040
]
118114678 (grin1b)
Ion channels [BR:
hsp04040
]
Ligand-gated channels
Glutamate (ionotropic)
118114678 (grin1b)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
Peripla_BP_6
SIP
DUF6724
Cas_APE2256
Motif
Other DBs
NCBI-GeneID:
118114678
NCBI-ProteinID:
XP_047197438
LinkDB
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Position
9:complement(28883018..28923019)
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AA seq
940 aa
AA seq
DB search
MELRGVLLLTVLQCCSVARGGCEPRLVNIGAVLSHKRFEQVFKEAVSQANTLYGKDKFKM
NAISVTHKPNAIQMALSVCEDLISNQVYAILVSHPPQSNDHLTPTPVSYTAGFYRIPVVG
LTTRMSIYSDKSIHLSFLRTVPPYSHQAQVWFDLMREFRWNHIILIVSDDHEGRAAQKRL
ETLLEERETKTKNRNYENLDQQNFDFRRTPKAEKVLLFSQDTNLTALLLEAKDLEARVII
LSASEDEAAAVYKAARQLNMTGSGYVWLVGEREMTGKALSEAPDGXXGLQLINGKNESAH
IADAVSVVAQSLQELFEKENITEPPRGCVGNTNIWRTGPLFKRVLMSSKYPDGLTGRIEF
NDDGDRRFATYGILNYQKPGRLVQVGVFNGSQVVMNPQRKIIWPGGETEKPVGYQMSTKL
KIVTIHQEPFVYVKPTKSDGTCKEEYTLNGVLIKKVICTGPNGTIPGQPTVPQCCYGFCI
DLLIKLAMSMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLGGLADMIVAPLTIN
NERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLL
DRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFA
MIIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELS
TMYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGI
GMRKDSPWKQNVSLAILSSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLV
AGGIVAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQDRKSGRAEPEPKLKTSF
RSITSTSNLKRRRASGDATPYPTDITGQLNLSDPSVSTVV
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atggagctgcgtggcgtgctgctcctcaccgtgctgcagtgctgctcagtggctcgtggc
ggttgtgaacctcggctggtgaacatcggagccgtcctgagtcataaacgtttcgagcag
gtgttcaaggaggcggtgagccaggccaacactctgtacggcaaggacaagtttaagatg
aacgccatctccgtcacacacaagcccaacgccatccagatggcgctgtctgtctgcgag
gacctcatctccaaccaggtgtacgcgatcttagtcagtcaccctcctcagtccaatgac
catctgactccgacgcctgtttcctacacagccggtttctacagaatccctgtggttggc
ctaacgacccgcatgtccatctactctgacaagagcatccacctgtccttcctgaggacg
gttcctccgtattcacaccaggctcaggtctggttcgacctcatgagagagttcaggtgg
aaccacatcatcctcatcgtcagcgacgaccacgaaggacgagctgcacagaagagactg
gagacactgctggaggagagagagaccaagactaaaaacaggaactatgaaaacctcgac
caacagaactttgacttcaggagaacacccaaggcagagaaggtgctgctgttcagccag
gacaccaacctgacagctctactgctggaggccaaagacctggaggctcgagtcatcatc
ctctctgccagtgaggatgaggctgctgccgtctataaagcagctcgtcagctcaacatg
accggctctggttacgtctggttggtcggagagagagagatgactggcaaagctctgagt
gaagctccagacggnnnnnngggcctccagctgattaatggtaagaacgagtcggctcac
atcgcggacgccgtgtcggtggtggctcaatctctgcaggagctatttgagaaggagaac
atcacagagcctccgaggggctgcgtggggaacaccaacatctggaggaccgggccgctc
ttcaaacgggtgctgatgtcgtcaaagtaccctgacggtctgacagggcggattgagttc
aacgacgatggcgaccgccgtttcgccacctacggcattctgaactaccagaagccaggt
cgcctcgtccaggtcggagtgttcaatggatcacaggttgtgatgaaccctcagaggaag
atcatctggcctggaggagagacagagaaaccagttggataccagatgtcgactaaactg
aagattgtcacgatccatcaggagccgtttgtttacgtgaagccgacaaagagtgacggg
acgtgcaaggaggaatacactcttaacggagtcttgattaagaaggtgatctgtaccgga
cctaacgggaccattccaggtcagcccaccgtccctcagtgttgctacggtttctgcatc
gacctgctcatcaaactggcaatgagcatgaacttcacctacgaggtccatctggtggct
gatgggaaatttggcacgcaggagcgagtcaacaacagtaacaagaaggaatggaacggg
atgatgggggagctgctggggggtctcgccgacatgatcgtcgcccccctcaccatcaac
aacgagcgcgctcagtatatagagttctccaaaccctttaaataccaggggctcaccatc
ctcgtcaagaaggaaatccctcgcagcactctggattcattcatgcagccgttccagagc
acactgtggctgttagtcggtctgtcggtccatgtggtggcagtgatgctttacctatta
gaccggttcagcccgtttggaaggtttaaagtgaacagtgaagaagaagaagaagacgcc
ctcaccctgtcctcggccatgtggttctcatggggagtactgttgaattctgggatagga
gaaggagctcccaggagtttctcagcgaggattctgggtatggtgtgggcggggtttgct
atgatcatcgtagcatcgtacactgccaacctggcagccttcctggtgctggaccggcct
gaggagcgcatcactggcatcaacgaccccaggctgcgtaacccgtcagataagttcatc
tacgccacagtgaagcagagctcggtggatatttacttcagacggcaggtggagctgagc
accatgtacagacacatggagaaacacaactacgagagcgctgctgaggccatccaggcc
gtcagagacaataagcttcatgccttcatttgggacagcgctgtgttggagttcgaggcg
tcgcagaagtgtgatcttgtgacgacaggagagcttttcttccgttctgggttcgggatt
ggaatgagaaaagacagtccatggaaacagaacgtgtctctagctattctcagttctcat
gagaacggcttcatggaggatttagacaagacgtgggttcgttaccaagagtgtgactcc
aggagcaacgcccccgctacgctcaccttcgagaatatggcaggtgtgttcatgctggta
gccggcggcatcgttgctgggatcttcctcatcttcatcgaaatcgcttacaaacgtcac
aaagatgctcgaaggaaacagatgcagctcgccttcgctgctgtgaatgtgtggaggaag
aacctgcaggataggaaaagtggtagagcagaacccgagcccaaactgaaaacctctttt
aggtccatcacttcgacctccaacctcaaacgccgtagggcctccggggacgccacgccg
tacccgactgacatcaccggccagctcaacctatcagatccctccgtcagcaccgtggtc
tga
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