(Translated by
https://www.hiragana.jp/
)
KEGG T04658: 108255876
Ictalurus punctatus (channel catfish): 108255876
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Entry
108255876 CDS
T04658
Symbol
grin1b
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1b isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04020
Calcium signaling pathway
ipu04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
108255876 (grin1b)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108255876 (grin1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ipu04040
]
108255876 (grin1b)
Ion channels [BR:
ipu04040
]
Ligand-gated channels
Glutamate (ionotropic)
108255876 (grin1b)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
Peripla_BP_6
SIP
DUF6724
NYN
DUF3663
Motif
Other DBs
NCBI-GeneID:
108255876
NCBI-ProteinID:
XP_047005912
Ensembl:
ENSIPUG00000020724
UniProt:
A0A2D0PRJ2
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All DBs
Position
22:complement(15790478..15824809)
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AA seq
937 aa
AA seq
DB search
MRLVLFAFLVSCSCARGGCEPKIVNIGAVLSQKRYEQVFKDAVTQANNIYGKDKFKMNAI
SVTHKPNAIQMALSVCEDLISNQVYAILVSHPPQSNDHLTPTPVSYTAGFYRIPVVGLTT
RMSIYSDKSIHLSFLRTVPPYSHQAQVWFDMMREFRWNHIILIVSDDHEGRAAQKKLETL
LEERETKSKNRNYENLDQLSYDNKRGPKAEKVLLFSQDTNLTALLQEARELEARVIILSA
SEDEAAAIYKAARQLNMTGSGYVWLVGEREMSGKALSEAPDGLLGLQLINGKNESAHIYD
AVAVVAQSIQELFEKENITEPPKGCVGNTNIWKTGPLFKRVLMSSKYPDGLTGRVEFNDD
GDRRFAHYSILNYQKTRLVQVGVYNGSQVMMNTQRKIIWPGGDTEKPRGYQMSTRLKIVT
IHQEPFVYVKPTLRDGTCKEEYTVNGVLIKKVICTGPNETIPGRPIVPQCCYGFCIDLLI
KLAMTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLGGLADMIVAPLTINNERA
QYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFS
PFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIV
ASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYR
HMEKHNYESAAEAIQAVRDGKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGIGMRK
DSPWKQNVSLAILSSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLVAGGI
VAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQDRKSGRAEPDPKKKASFRSIS
TNLASNIKRRRSSKDTPYPTDITGQLNLSDPSVSTVV
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctggttctcttcgccttcctcgtgtcttgctcgtgcgcacggggcggctgcgag
cccaagatcgtcaacatcggcgccgtgttgagccagaagcgctacgaacaggtgttcaag
gacgcggtgacccaggccaacaacatctacggcaaagacaagttcaagatgaacgcgatc
tccgtcactcacaaacccaacgccattcagatggcactgtccgtgtgtgaggatctcatc
tcaaaccaggtctatgccattttggttagtcatcctccccagtccaatgaccatctaacg
ccgaccccagtgtcctacacagctggattctatcgcatacctgtagtgggactgaccacc
cgcatgtccatctactcagacaagagcatccatctgtcattcttgcgcacggtgcctcct
tactcccaccaggcccaggtgtggtttgacatgatgcgcgagttccgctggaatcacatc
atcctgatcgtgagcgatgaccacgagggccgcgcggctcagaagaaactggagacgctc
ctggaggagagggagacgaagagtaaaaacaggaactatgaaaacctcgaccaactgtcc
tatgacaacaagcgaggacccaaggcagagaaagtgctcttgttcagccaagacacaaat
ctgactgcactgctccaggaggccagagagctggaggccagagtcatcatcctgtctgcc
agcgaggacgaggcagcggccatttacaaagcagctcgccagctcaacatgaccggctct
ggttacgtgtggctggtgggggaaagggagatgtctggtaaagctctaagtgaagctcca
gatggcttgctcggcctccagctgatcaacggaaagaacgagtcggcgcacatctacgac
gccgtggcagtggtggcacagtccatccaggagctctttgagaaggagaacatcaccgag
cctccgaaaggctgcgtgggcaacacaaacatctggaagactgggccgctcttcaaacga
gtactgatgtcatccaagtatccagatggcctcacaggccgcgtggagtttaatgatgac
ggagacaggaggttcgcccactacagcattctcaactaccagaagacccggttggtccaa
gtgggcgtctataacggctcgcaggtcatgatgaacacgcagaggaagatcatttggcca
ggaggagacactgagaagccgagaggttatcagatgtcaacaagattgaagattgtcacc
attcatcaagagccgtttgtgtacgtgaagccgacgctgcgagacgggacatgtaaagag
gaatacaccgtaaatggagtcctgatcaaaaaagtgatctgcactgggcccaacgagaca
attcctggtcgtcccatagtgcctcagtgctgctatgggttttgcatcgacctcttgatc
aaactcgcaatgacaatgaacttcacctacgaagtgcacctagtggctgatgggaaattt
ggcacccaggagcgtgtgaataacagcaataagaaggagtggaacggcatgatgggagag
ctgctgggtggcttggcagacatgattgtggctccacttaccatcaataacgaacgagcc
cagtacatcgagttctccaaaccgtttaagtaccaggggctcaccatccttgtcaaaaag
gaaatacctcgcagtacgctggactcgttcatgcaaccctttcagagcactctgtggtta
ctggtgggtctttcggtccatgttgtggcggtgatgctctacctattagaccgtttcagc
ccatttggaaggtttaaagtgaatagtgaagaggaagaagaggacgccctcaccttatcc
tctgccatgtggttctcttggggggtacttttgaactccggtattggagaaggtgcccca
cggagcttttcggcgaggattttaggtatggtgtgggctggttttgctatgattatagtt
gcatcttatactgccaatttggcagccttcctagtgttggatcggcctgaggagcgcatt
accggcatcaacgaccctaggctgcgaaatccatcagacaagttcatctacgccacggtg
aagcaaagctctgtggacatttacttccggcgtcaagttgagctgagcaccatgtaccgc
cacatggaaaagcacaactacgagagcgccgctgaggccatccaggctgtgcgagacggc
aaactccatgcttttatctgggattcagctgtgttggagtttgaagcctcgcagaagtgc
gacctggtcaccacgggagagttgttcttccgttcgggctttggcatcggcatgcgtaaa
gacagcccttggaagcagaatgtttccctggccattctcagctctcatgagaatgggttc
atggaggacctggataaaacttgggtgagataccaggagtgtgactccaggagcaatgcc
ccagccacactcacctttgagaatatggcaggcgtgtttatgttggtggctggcggcatc
gtcgccgggatcttcctcatcttcatcgagattgcgtacaagcgacacaaagacgctcgc
aggaagcagatgcagttggcctttgcagcggttaatgtctggaggaagaacctgcaggat
aggaaaagtggtagagcagagcccgaccccaaaaagaaagcctcttttaggtccatcagt
accaacctggcctccaacatcaagagacgtaggtcctccaaagacacgccatatcccacg
gacatcaccggccagctcaacctgtccgacccctccgtcagcacggtggtgtga
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