(Translated by
https://www.hiragana.jp/
)
KEGG T04658: 108265440
Ictalurus punctatus (channel catfish): 108265440
Help
Entry
108265440 CDS
T04658
Name
(RefSeq) H-2 class II histocompatibility antigen, A-U alpha chain-like
KO
K06752
MHC class II antigen
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04145
Phagosome
ipu04514
Cell adhesion molecules
ipu04672
Intestinal immune network for IgA production
ipu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
108265440
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
108265440
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
108265440
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
108265440
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ipu04147
]
108265440
Exosome [BR:
ipu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108265440
Exosomal proteins of epithelial cells
108265440
Exosomal proteins of breast milk
108265440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C1-set
MHC_II_alpha
Ig_3
Ig_2
ig
C2-set_2
I-set
Motif
Other DBs
NCBI-GeneID:
108265440
NCBI-ProteinID:
XP_053536026
Ensembl:
ENSIPUG00000002989
UniProt:
A0A9F7TKD5
LinkDB
All DBs
Position
5:1843135..1845931
Genome browser
AA seq
235 aa
AA seq
DB search
MRLFLLCFTLVCVKDTEAQNKLHHLQLAACSDTDKEYMFGDDGEVEVYADFEKKDIVNAL
PPFADPIEFPAGFAAAEGATANCQANLQVLSGDFKDQPLPQDAPQTSIYARNGVQLGSEN
TLICHSIRFFPPPVRVRWTKNNLDVTGESSLSQYYPNEDKTYNQFSHLPFTPQEGDVYTC
TVQHEALQTPDTRTWEVNVDLPSVGPAVFCGVGLAVGLLGVATGTFFLVKGNQCN
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgagattatttctgctctgtttcacactggtgtgtgtgaaggacactgaagcacagaat
aaattgcaccatttgcagttggccgcgtgctcagacacggataaggagtatatgtttggt
gatgatggagaggtggaggtttacgcagattttgagaagaaggatatagtgaatgcgctg
cctccgttcgctgatccgatagagttccccgcaggattcgcggccgccgagggtgctact
gccaactgccaagcaaacttacaggtgctttcaggagactttaaagaccagccgctgcca
caggacgccccacagacctccatctatgccagaaatggtgtacagctgggttcagagaac
acactgatctgtcactccataaggttcttccctccgcctgtccgtgtgcgctggaccaaa
aacaacctggacgtgacgggtgaatcctcactcagccagtattaccccaatgaggacaaa
acctacaaccagttctcccacctgcccttcactccacaggaaggagacgtgtacacctgc
acggtgcagcacgaggccctgcagacgcctgacaccaggacatgggaggtgaatgttgat
ctccccagtgtgggtccggctgtgttttgtggagtgggtctggctgtaggattgctcgga
gtcgctaccggaactttcttcctcgttaaaggaaaccagtgcaactga
DBGET
integrated database retrieval system