(Translated by
https://www.hiragana.jp/
)
KEGG T04895: 108899537
Lates calcarifer (barramundi perch): 108899537
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Entry
108899537 CDS
T04895
Name
(RefSeq) H-2 class II histocompatibility antigen, A-U alpha chain isoform X1
KO
K06752
MHC class II antigen
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04145
Phagosome
lcf04514
Cell adhesion molecules
lcf04672
Intestinal immune network for IgA production
lcf05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
108899537
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
108899537
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
108899537
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
108899537
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lcf04147
]
108899537
Exosome [BR:
lcf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108899537
Exosomal proteins of epithelial cells
108899537
Exosomal proteins of breast milk
108899537
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C1-set
MHC_II_alpha
Ig_3
Ig_2
ig
C2-set_2
DUF2530
Motif
Other DBs
NCBI-GeneID:
108899537
NCBI-ProteinID:
XP_018555540
UniProt:
A0AAJ7QGE1
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All DBs
Position
LG15:complement(4908588..4912159)
Genome browser
AA seq
243 aa
AA seq
DB search
MTRDLFLVLLLICLPKCIQGKHLLRFLTFCQKDVAGDGQYDIEYDSDQLLYVDPITYRAV
PRLPEFAEQWIPDPGLAKDTYVSLGTCKYNIPRAIKGENSPPEAIVIPTSLIYPKQDMEI
GVPNTLICFVNDFHPPVVDITWTRNGQFVDQSEVSQTQYYSNSDFSFRTSSYLNFTPQEN
DIYSCSVGHISLQAPLTRFWEVEVHTDHQTVATAVCVCGVILGLIGVVTGLWFIMKANKY
HWV
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgacgagggacctgttcctggtactgctgcttatttgtcttccaaaatgcattcaaggt
aaacatttgcttcgctttttgaccttttgtcaaaaggatgtggcgggtgatggccagtat
gacattgaatatgatagtgatcagctcctctatgttgatcctatcacctatcgggcagtt
ccacgcctccccgagtttgcagagcagtggatcccagaccctggactggccaaagacaca
tatgtgtccctgggtacctgcaagtacaatatcccacgtgccataaaaggagaaaatagt
cctccagaggccatagttattcctacctccctgatctacccaaaacaggacatggagatt
ggagttcccaacacccttatctgctttgtcaacgacttccatccgcctgtagttgacatc
acctggaccagaaatgggcagtttgtggaccagagtgaagtcagccaaactcagtactac
tccaacagcgacttcagcttccggacatcatcatacttgaatttcacgccgcaggagaac
gacatctactcctgcagtgtgggccacatcagcctgcaggcgcctctcaccagattctgg
gaggttgaagtacacacagaccaccagactgtagcgacagcagtgtgtgtttgtggtgta
atcctggggctgattggagttgtcacaggactctggttcatcatgaaagccaacaagtac
cactgggtttaa
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