(Translated by
https://www.hiragana.jp/
)
KEGG T09179: 109892015
Oncorhynchus kisutch (coho salmon): 109892015
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Entry
109892015 CDS
T09179
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C-like isoform X1
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04020
Calcium signaling pathway
oki04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
109892015
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
109892015
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oki04040
]
109892015
Ion channels [BR:
oki04040
]
Ligand-gated channels
Glutamate (ionotropic)
109892015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
NMDAR2_C
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
109892015
NCBI-ProteinID:
XP_031683658
Ensembl:
ENSOKIG00005002936
LinkDB
All DBs
Position
LG6:complement(79552769..79663853)
Genome browser
AA seq
1439 aa
AA seq
DB search
MGIHLGHLSDSPWWWPLLLLLLLCTAPWCQGRPFATPLPAVNVAVVFSGSAYQQEIKGRL
SRENFMDLPLEVNPITVLVNNTNPRALLTRICDTLAANRVHGVVFEDNIGSEAVAQILDF
IALQTAVPIVGISGGSAMVLPHKGDGSTFLQLGSSIEQQINGMFKVMEEYNWDSFVVITS
LYPGYEVYVDYVKTFTDTSYFMWELQDVLTFDMSADGMNDIRARRLLQQIDAQVLLVYCS
HEEAQYLFSMAGEVGLLGPGYIWILPSLAVGNPDMPPPYSFPVGLISIITDRWRMSLRKR
VRDGVAIVVKGVQSFHKQRGFIPEGQNDCHSPVRASSNDTLFRHMLNVTWEHNDFSFNPE
GYLINPAMVIITLDRERQWDKVGNYEMGILQMRYPVWPRYGTYLEPVSDNRHLTVATLEE
RPFVIVEAVDPMTGTCVSNTVPCRRQSNKTETIVGHTEPYTKLCCKGFCIDILKKLSRTT
KFSYDLYLVTNGKHGKLVRGSWNGMIGEVVYKRADMAIGSLTINEERSEIIDFSVPFVET
GISVMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAVTVFIFEYCSPVGYNRSLVSA
KGECQLRPPFPLPLPSRISKGRKSRKNPGGPTFTIGKSVWLLWGIVFNNSVPIENPKGTT
SKVMVLVWAFFAVIFLASYTANLAAFMIQEQYTDTVSGLSDKKFQKPQEQYPPFRFGTVP
NGSTERNIRSNYPEMHAHMVKYNQKGVEDALNSLKSGKLDAFIYDAAVLNYMAGKDEGCK
LVTIGSGKVFATTGYGIALQKESRWKRPIDLALLQFLADGDTQKLQTVWLTGICRNEKKE
VMSSKLDIDNMAGVFYMLLVAMGLSLLVFSWEHLLYWKLRHSVRKSERLDFLLAISRGIY
SCFNGVEDSDRNGNLQNPDVTTNYTQANMLKMLQTAKDIVTSTRVENSLDNATKTIENWS
RRGADNVRVGLPPRVATTIDMGHSRLPYISSITDNHSPYPQRALASTFPIHYSDSTTQPL
LDKSRVVTRPTPLRYTLPARGSHHFYERTLPISSLSSPHIAMRDPAPPSTSSHNPHPHHS
SRLYVETQPRLPGSPFVPYREFQVPDIYVEHHKGPLGRKFSYPPDHMGRKKRSHSYVFSE
AQDTRGRNDYDEPTSCLAELRANHLLNNHASSASTMACMGGHYPSGSASCNSCMKPYLEP
EMEDVPLLGKDKVNRRASFLKATWSSDRIRQLGEKPSTSTMPDLFPRVVVANPKPHKLYG
SQGNNLCYPLAAEPAYLDPAHMRSYPYKQHKLKCSQSTRLPSYREAILQNAAALRRSSST
VVHRHYSTYLNSYTDLPVYVGPLPQGRGQFYDKDMCHLFPCASHCPNNNALVPRMGDRQV
VYQNNMFGGYEGAVGRSREEPPLPGSGSRDRREVLVARRVNSPYVPKTWGRVSSLESEV
NT seq
4320 nt
NT seq
+upstream
nt +downstream
nt
atgggcattcatctaggccacttgagcgactccccgtggtggtggccgctactgctgctg
ttgctgctctgcactgccccctggtgccaaggtcggcctttcgcaacgcccttgccagca
gtcaacgtggcggtggtgttcagtggctcggcctaccagcaggagatcaaggggcgtctc
agcagggagaacttcatggacctgcccttggaggtgaatcccatcacagtgctggtaaac
aacaccaaccctcgggccctgctcacacgcatctgtgacacactggcggccaatcgcgta
catggtgtggtgtttgaagacaacatcggctcggaagccgtggcacagatcctggacttc
attgccctgcagacggccgtgcccatcgtgggcatcagcgggggctccgccatggtcctg
ccacacaagggcgacggctccacgttcctccagctgggctcctccattgagcagcagata
aacggcatgttcaaggtgatggaggagtacaactgggacagcttcgtggtcatcaccagt
ctgtacccgggctacgaggtctatgtggactatgtcaagaccttcactgacaccagctac
ttcatgtgggaactgcaggacgtgctgaccttcgacatgtctgccgacggcatgaacgac
atccgggcacggcgcctgctgcagcagatcgacgcccaggtactgctggtatactgctcc
cacgaggaggcccagtaccttttcagtatggccggagaggtcggcctgctggggcctggc
tacatctggatcctccctagccttgccgtggggaacccagacatgcccccaccatacagc
ttccctgtgggcctcatcagcatcatcaccgaccgctggcggatgagcctgaggaagagg
gtgcgggatggggtggccatcgtggtcaaaggggtgcagagcttccacaaacagaggggc
ttcatccctgagggccagaacgactgccacagccctgttagggcatcttctaatgataca
ctgttcaggcacatgttaaacgtaacatgggaacacaacgacttctcgttcaaccctgaa
gggtacctgatcaacccggctatggtcatcatcaccttagatcgagagagacagtgggat
aaggtggggaactatgagatggggatcctgcagatgagatacccggtgtggcctcgctac
ggcacctatctggagcccgtatcagataacagacacttgactgtggccacactggaggaa
cgtccctttgtcatagtggaggctgtcgaccccatgactgggacctgtgtcagcaacact
gtgccctgccgccgccagtccaacaagacagagactattgtaggacatactgagccctac
accaaactatgctgtaagggtttctgcatagacatcctgaagaagctgtcccgcaccacc
aaattctcctacgacctctacctggtcaccaacgggaagcacggcaagctggtcagaggc
agttggaacggcatgatcggagaggtggtatacaagcgggcggacatggccattggctcg
ctgaccataaacgaagagcgctcagaaattatcgacttctccgtgccgtttgtggagacg
gggatcagtgtgatggtcgccaggagcaatgggaccgtctcaccctctgcctttcttgag
ccctacagtccggcggtgtgggtgatgatgtttgtgatgtgcttaacggtggtagctgtc
acagtgtttatctttgagtactgcagccctgtggggtacaaccggagtctggtgagcgcc
aagggtgagtgtcagctccgaccacctttccctctacctctaccctcccgtatcagcaaa
ggtagaaagtcacggaaaaatcccggaggccccaccttcactattgggaagtctgtgtgg
ctgctgtggggcatcgtcttcaacaactctgttccaattgagaaccccaagggcaccacc
agcaaggtcatggtcctggtatgggccttcttcgctgtcatcttcctggcctcctacact
gccaacctggcagccttcatgatccaggagcaatacactgacacagtctctggactgagt
gacaaaaagttccagaagccacaggagcagtatccaccatttcgttttggtacggtccca
aatggaagcacagagaggaacatccggagcaactaccctgagatgcatgcccacatggtc
aaatacaaccagaagggtgtggaggacgccctcaacagcctcaaatcagggaaactggat
gccttcatctatgacgctgctgtgctgaactacatggcaggtaaagacgagggctgtaag
ctggtgaccatcggcagtgggaaggtctttgccaccactggctacggcattgccttgcag
aaggagtcccgatggaaacgtcctatagacctggccctgctccagttcctagcggatggt
gacacacagaagctgcagacggtgtggctcacagggatctgtcgtaacgagaagaaggag
gtgatgagcagtaagctggacatagataacatggcgggcgtcttctacatgctgctggtg
gccatggggctcagtctcctggtgttcagctgggaacatctgctctactggaagctgaga
cactctgtacgcaagtctgaacgcctcgacttcctgctcgccatcagcaggggaatctac
agctgcttcaacggtgtggaggactctgaccgcaacggaaacctgcagaaccctgacgtc
accaccaactacacccaggccaacatgctgaagatgctgcagacagccaaggacatcgtg
acctcgaccagagtggagaactccctggacaatgccaccaagaccatagagaactggagc
cggcgaggagccgacaatgtgcgggttggcctgccgcctcgggtggcaaccactatagac
atgggccacagccgcctgccctacatctccagcatcacggacaaccactcgccctacccc
cagagggcgctcgcttccacattccccatccactactcggacagcaccacccagcccctg
ctggacaaatccagggtggtgacgcggcctaccccactccgctacacccttccggcccgt
ggcagccaccacttctatgagaggaccctacccatctccagccttagcagcccccacatc
gccatgagggaccctgctccccctagcacctccagtcacaacccacacccccaccacagc
agcaggctgtatgttgagacccagccccggctccccggctccccgtttgtcccttacaga
gagttccaggtgcctgacatctatgtggaacaccacaaggggcccctgggacggaagttc
agctacccccctgaccacatgggcaggaagaagaggtcccacagctacgtgttttccgag
gcccaagacaccagggggaggaacgactatgatgagccaacctcctgtctggctgagctg
agggccaaccacctcctgaacaaccacgcctcttctgcatcaaccatggcctgcatgggg
ggccactaccccagcggcagcgccagctgcaactcctgcatgaagccctacctggagcct
gaaatggaggatgtgcccttgctggggaaggacaaggtcaaccgccgggcctcttttctc
aaggccacctggagcagtgacaggatccgccaactgggcgagaagccctccacctccact
atgcctgacctgttcccccgcgtagtggtggccaaccccaagccccacaagctgtatggc
agccaggggaacaacctgtgctaccccctggccgctgagcctgcctacctagacccggct
catatgcgttcctacccctacaagcagcataagctcaagtgctcccagtccacccggcta
ccatcctacagggaggctatcctgcagaacgcagccgccttgcggcgctcttcctccact
gtggtgcacagacactactccacctacctgaactcctacacagacctgcctgtatacgtg
gggccactgccccaggggcgtgggcagttctacgacaaggacatgtgccacttgttcccc
tgtgcaagccactgccctaacaacaatgccctggtgccccgtatgggggaccggcaggtg
gtgtaccagaacaatatgtttgggggctacgagggcgcggtgggacggtcgcgggaggag
ccccccctgcccgggtctgggagcagggatcggagggaggtcctggtggccagaagagtc
aacagtccctatgtgccaaagacctggggcagggtatccagtctggagtctgaggtctga
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