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https://www.hiragana.jp/
)
KEGG T02443: 101169874
Oryzias latipes (Japanese medaka): 101169874
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Entry
101169874 CDS
T02443
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1 isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04020
Calcium signaling pathway
ola04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
101169874
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
101169874
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ola04040
]
101169874
Ion channels [BR:
ola04040
]
Ligand-gated channels
Glutamate (ionotropic)
101169874
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
Peripla_BP_6
Motif
Other DBs
NCBI-GeneID:
101169874
NCBI-ProteinID:
XP_023816256
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All DBs
Position
12:complement(26845631..26883075)
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AA seq
964 aa
AA seq
DB search
MRLFLLAALFSCSFARAGCEPKIVNIGAVLSQKRYEQVFKDAVTQANQVYGRDKFKLTAI
SVTHKPNAIQMALSVCEDLISSQVYAILVSHPPQSNDHLTPTPVSYTAGFYRIPVVGLTT
RMSIYSDKSIHLSFLRTVPPYSHQAHVWFDLMREFNWNHIILIVSDDHEGRAAQKRLETL
LEERETKNKKRNYENLDQLSYDNKRGPKAEKVLQFSQETNLTALLLEAKELEARVIILSA
SEEDAAAVYKAARFLNMTGSGYVWLVGEREMSGKALTEAPDGLIGLQLINGKNESAHIND
AVAVVAQSIQELFEKENITEPPRGCVGNTNIWKTGPLFKRVLMSSKYPEGLTGRVEFNDD
GDRKYAHYSILNYQKSRLVQVGIYNGTQVVMNNQRKIIWPGGETEKPQGFQMSTRLKIVT
IHQEPFVYVKPTMLDGTCKEELTLNGVLIKKVICTGPNETIPGRPIIPQCCYGFCIDLLI
KLAMTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLGGLADMIVAPLTINNERA
QYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFS
PFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIV
ASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYR
HMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGIGMRK
DSPWKQNVSLAILSSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLVAGGI
AAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQESQEASGSQAVAGTPSLPSSS
LETQDDRKSGRAEPDPKKKASFRSISTTLASSIKRRRSSKDTQFPPTDITGQLNLSDPSV
STVV
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctctttctgttggccgcgctcttctcgtgctccttcgcgcgggccggctgcgag
cccaagatcgtgaacatcggggccgtcctgagccagaagaggtacgagcaggtcttcaaa
gacgccgtgactcaggccaaccaggtctacggcagggacaagttcaagctgaccgccatc
tctgtaacgcacaaacccaacgccatccagatggctctgtccgtgtgtgaggacctcatc
tccagccaggtctatgccatcctggtgagtcatcccccacagtccaacgaccacctcact
cccacgcccgtctcctacactgccggcttctaccgcatccctgtggtggggctcaccacc
cgcatgtccatctactctgacaagagcatccacctgtccttcctgcgcaccgtgccgccg
tactcccaccaggcgcacgtgtggttcgacctgatgcgcgagttcaactggaaccacatc
atcctgatcgtcagcgacgaccacgaggggcgggcggcccagaagaggctggagacgctg
ctggaggagagggagaccaagaataaaaaaaggaactatgaaaacctcgaccaactgtcc
tatgacaacaagcgaggacctaaggcagagaaagtcctccagttcagccaggagactaac
ttaactgccctgctgctggaggctaaagagctggaggcccgagtcatcatcctgtctgcc
agcgaggaggacgcagctgcggtgtacaaggccgcccgtttcctgaacatgacgggctca
ggctacgtgtggctggtgggggagcgggagatgtcgggtaaagccctgaccgaggcgccg
gacgggctgatcggcctccagctcatcaacgggaagaatgaatcggctcacattaacgat
gcggtggccgtggtggctcagtccatccaagagctctttgagaaggagaacatcacagaa
cccccccgaggatgtgtgggaaacaccaacatctggaagacaggacccctcttcaagcgg
gttctgatgtcgtccaagtatccagagggcctcacaggacgcgtggagttcaacgatgac
ggagacaggaagtacgcgcactacagcatcctcaactatcagaagagtcgccttgttcaa
gttggcatttacaacggcacgcaggtggtgatgaacaatcagcggaagataatctggcct
ggaggagagacggagaaaccacagggcttccagatgtccactcggctaaagatagtgacc
atacaccaggagccttttgtgtatgtgaaacccaccatgctggatgggacctgcaaggag
gaactgaccctgaacggagtcctaataaaaaaggtcatctgcacggggcccaatgagacc
atcccagggcgccccatcatacctcagtgttgttatggattctgtattgacctcctgatc
aagttggcgatgaccatgaactttacttatgaggtgcatttggtggccgatggaaagttt
ggaactcaagaacgggtgaacaacagcaacaagaaagagtggaatgggatgatgggagag
ctcctggggggcctggctgacatgatcgtggccccactgactataaacaacgagcgagcc
caatacatcgagttctccaaaccctttaaataccaaggtctcaccatcctggttaaaaag
gaaatcccgcgcagcactctggactcgttcatgcagccgttccagagcacgctgtggctg
ctggtgggtctttcggtgcatgtggtggcggtgatgctttaccttctagaccggttcagt
ccgtttggaagattcaaagtaaacagtgaagaagaagaggaagatgccctcaccttatca
tccgccatgtggttctcctggggagtgttgctgaactctggaattggagaaggtgcccca
cgcagcttctcagccagaatcctgggcatggtgtgggccggctttgccatgatcattgtg
gcttcttatactgccaacctggctgccttcctggtgttggaccggcccgaggagcgcatc
actggcatcaatgatccaaggctgcggaatccatctgacaagttcatctatgcgacggtg
aagcaaagctccgtggacatctacttccgccggcaggtcgagctgagcacgatgtaccgc
cacatggagaagcacaactacgaaagcgccgccgaggccattcaggctgtgcgcgacaac
aagctgcatgctttcatctgggactctgcggtgctggagtttgaagcctcgcagaagtgt
gacctggtaaccacgggagagctgtttttccgttcgggctttggcataggcatgcgcaag
gacagcccctggaaacagaatgtgtccctggccattctcagttctcatgagaatggcttc
atggaagacctagataaaacctgggtgagataccaggagtgtgactcgaggagcaatgcc
ccagccacactcacctttgaaaacatggcaggagtcttcatgctggtggctggaggcatt
gcagcagggatcttcctcatcttcattgaaatcgcctacaagagacacaaagacgcccgc
aggaagcagatgcagctggcctttgcggccgtcaacgtttggaggaagaacttgcaggaa
agtcaggaggcctctggaagtcaagcggtggctgggaccccctctttaccctcttcctct
ctagagactcaggatgataggaaaagtggtagagcagagcccgaccccaaaaagaaagcc
tcttttaggtccatcagtaccaccctggcctccagcatcaagagacgtaggtcctccaaa
gacacgcaatttccacccactgacatcacgggccaactcaacctatcggacccgtctgtc
agcaccgtggtgtga
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