(Translated by
https://www.hiragana.jp/
)
KEGG T01003: 24981
Rattus norvegicus (rat): 24981
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Entry
24981 CDS
T01003
Symbol
RT1-Db2
Name
(RefSeq) RT1 class II, locus Db2 precursor
KO
K06752
MHC class II antigen
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04145
Phagosome
rno04514
Cell adhesion molecules
rno04612
Antigen processing and presentation
rno04640
Hematopoietic cell lineage
rno04658
Th1 and Th2 cell differentiation
rno04659
Th17 cell differentiation
rno04672
Intestinal immune network for IgA production
rno04940
Type I diabetes mellitus
rno05140
Leishmaniasis
rno05145
Toxoplasmosis
rno05150
Staphylococcus aureus infection
rno05152
Tuberculosis
rno05164
Influenza A
rno05166
Human T-cell leukemia virus 1 infection
rno05168
Herpes simplex virus 1 infection
rno05169
Epstein-Barr virus infection
rno05310
Asthma
rno05320
Autoimmune thyroid disease
rno05321
Inflammatory bowel disease
rno05322
Systemic lupus erythematosus
rno05323
Rheumatoid arthritis
rno05330
Allograft rejection
rno05332
Graft-versus-host disease
rno05416
Viral myocarditis
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
24981 (RT1-Db2)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
24981 (RT1-Db2)
09150 Organismal Systems
09151 Immune system
04640 Hematopoietic cell lineage
24981 (RT1-Db2)
04612 Antigen processing and presentation
24981 (RT1-Db2)
04658 Th1 and Th2 cell differentiation
24981 (RT1-Db2)
04659 Th17 cell differentiation
24981 (RT1-Db2)
04672 Intestinal immune network for IgA production
24981 (RT1-Db2)
09160 Human Diseases
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
24981 (RT1-Db2)
05164 Influenza A
24981 (RT1-Db2)
05168 Herpes simplex virus 1 infection
24981 (RT1-Db2)
05169 Epstein-Barr virus infection
24981 (RT1-Db2)
09171 Infectious disease: bacterial
05150 Staphylococcus aureus infection
24981 (RT1-Db2)
05152 Tuberculosis
24981 (RT1-Db2)
09174 Infectious disease: parasitic
05145 Toxoplasmosis
24981 (RT1-Db2)
05140 Leishmaniasis
24981 (RT1-Db2)
09163 Immune disease
05310 Asthma
24981 (RT1-Db2)
05322 Systemic lupus erythematosus
24981 (RT1-Db2)
05323 Rheumatoid arthritis
24981 (RT1-Db2)
05320 Autoimmune thyroid disease
24981 (RT1-Db2)
05321 Inflammatory bowel disease
24981 (RT1-Db2)
05330 Allograft rejection
24981 (RT1-Db2)
05332 Graft-versus-host disease
24981 (RT1-Db2)
09166 Cardiovascular disease
05416 Viral myocarditis
24981 (RT1-Db2)
09167 Endocrine and metabolic disease
04940 Type I diabetes mellitus
24981 (RT1-Db2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rno04147
]
24981 (RT1-Db2)
Exosome [BR:
rno04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
24981 (RT1-Db2)
Exosomal proteins of epithelial cells
24981 (RT1-Db2)
Exosomal proteins of breast milk
24981 (RT1-Db2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MHC_II_beta
C1-set
Ig_3
ig
Ig_2
Tricorn_C1
C2-set_2
Motif
Other DBs
NCBI-GeneID:
24981
NCBI-ProteinID:
NP_001158298
RGD:
1595922
Ensembl:
ENSRNOG00000030431
Vega:
OTTRNOG00000001678
LinkDB
All DBs
Position
20:complement(4521929..4541654)
Genome browser
AA seq
286 aa
AA seq
DB search
MVCLWLPRDPCVAAVVLSLLMLSPPVALVRDPRPRFLEQLKAECHYVKGREHVWSVTRFI
YNQEEFARFDSVFGKFLAVTELGRPIAEYLNTQKDMLDNYRASVDRCRNNYDLVDIFMSN
LKAKPKVTVYPSKTQPLEYHNLLVCSVSDFYPGTIEIRWFRNGEEEKTGVVSTDLISNGD
WTYQTLVMLETVPQGGEVYTCQVEHPSLTSPVRVEWRARSTSAQNKMLSGAMGMALGLFI
LAVGLFIYLRNLRGSVSHGAGEGAESSTSRLTGSRSECHTGPALSV
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atggtgtgtctgtggctccccagagacccctgtgtggcggctgtggtcctgagtctgtta
atgctgagtcctcccgtggctttggtcagggacccccgaccacgttttctggagcagttg
aaggctgagtgtcactacgtcaaggggagggagcatgtgtggagcgtgaccagattcatc
tataaccaggaagagtttgcccgctttgacagtgtctttgggaagttcctggcagtgact
gagctggggcggcccatagctgagtacttgaacacccagaaggacatgctggacaattac
cgtgcctctgtggacaggtgcagaaataactatgacctggttgatatcttcatgtcgaac
ttaaaagctaaacccaaggtgaccgtgtacccttcaaagacgcagcccctggaataccac
aacctcctggtctgctctgtgagtgacttctaccctggcaccattgaaatcagatggttc
cggaatggtgaggaggaaaagactggagtcgtgtccaccgacctgatctctaatggagac
tggacctaccagaccctggtgatgctggagacggttcctcagggtggagaggtttacacc
tgccaggtggagcatcccagcctgaccagccctgtcagagtggagtggagggctcgatcc
acatctgcacagaacaagatgctgagcggagccatgggcatggcgctaggtctgttcatc
ctcgcggtggggctgttcatctacttaaggaatctgagaggatcagtgtctcatggtgct
ggagaaggagccgagagttccacatccagattgacgggcagcaggagtgaatgtcacact
gggcctgcattgagcgtctga
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integrated database retrieval system