(Translated by
https://www.hiragana.jp/
)
KEGG T01003: 309621
Rattus norvegicus (rat): 309621
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Entry
309621 CDS
T01003
Symbol
RT1-Ba
Name
(RefSeq) rano class II histocompatibility antigen, B alpha chain precursor
KO
K06752
MHC class II antigen
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04145
Phagosome
rno04514
Cell adhesion molecules
rno04612
Antigen processing and presentation
rno04640
Hematopoietic cell lineage
rno04658
Th1 and Th2 cell differentiation
rno04659
Th17 cell differentiation
rno04672
Intestinal immune network for IgA production
rno04940
Type I diabetes mellitus
rno05140
Leishmaniasis
rno05145
Toxoplasmosis
rno05150
Staphylococcus aureus infection
rno05152
Tuberculosis
rno05164
Influenza A
rno05166
Human T-cell leukemia virus 1 infection
rno05168
Herpes simplex virus 1 infection
rno05169
Epstein-Barr virus infection
rno05310
Asthma
rno05320
Autoimmune thyroid disease
rno05321
Inflammatory bowel disease
rno05322
Systemic lupus erythematosus
rno05323
Rheumatoid arthritis
rno05330
Allograft rejection
rno05332
Graft-versus-host disease
rno05416
Viral myocarditis
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
309621 (RT1-Ba)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
309621 (RT1-Ba)
09150 Organismal Systems
09151 Immune system
04640 Hematopoietic cell lineage
309621 (RT1-Ba)
04612 Antigen processing and presentation
309621 (RT1-Ba)
04658 Th1 and Th2 cell differentiation
309621 (RT1-Ba)
04659 Th17 cell differentiation
309621 (RT1-Ba)
04672 Intestinal immune network for IgA production
309621 (RT1-Ba)
09160 Human Diseases
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
309621 (RT1-Ba)
05164 Influenza A
309621 (RT1-Ba)
05168 Herpes simplex virus 1 infection
309621 (RT1-Ba)
05169 Epstein-Barr virus infection
309621 (RT1-Ba)
09171 Infectious disease: bacterial
05150 Staphylococcus aureus infection
309621 (RT1-Ba)
05152 Tuberculosis
309621 (RT1-Ba)
09174 Infectious disease: parasitic
05145 Toxoplasmosis
309621 (RT1-Ba)
05140 Leishmaniasis
309621 (RT1-Ba)
09163 Immune disease
05310 Asthma
309621 (RT1-Ba)
05322 Systemic lupus erythematosus
309621 (RT1-Ba)
05323 Rheumatoid arthritis
309621 (RT1-Ba)
05320 Autoimmune thyroid disease
309621 (RT1-Ba)
05321 Inflammatory bowel disease
309621 (RT1-Ba)
05330 Allograft rejection
309621 (RT1-Ba)
05332 Graft-versus-host disease
309621 (RT1-Ba)
09166 Cardiovascular disease
05416 Viral myocarditis
309621 (RT1-Ba)
09167 Endocrine and metabolic disease
04940 Type I diabetes mellitus
309621 (RT1-Ba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rno04147
]
309621 (RT1-Ba)
Exosome [BR:
rno04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
309621 (RT1-Ba)
Exosomal proteins of epithelial cells
309621 (RT1-Ba)
Exosomal proteins of breast milk
309621 (RT1-Ba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MHC_II_alpha
C1-set
Ig_3
C2-set_2
Ig_2
Motif
Other DBs
NCBI-GeneID:
309621
NCBI-ProteinID:
NP_001008831
RGD:
1595867
Ensembl:
ENSRNOG00000000451
Vega:
OTTRNOG00000001675
UniProt:
Q6MGA0
A0A023ILS4
LinkDB
All DBs
Position
20:4577057..4581650
Genome browser
AA seq
255 aa
AA seq
DB search
MPLSRALILGVLALTTMLSPCGGQDDIEADHVAAYGINMYQYYESRGQYTHEFDGDEEFY
VDLDKKETIWRIPEFGQLTSFDPQGGLQEIATAKYNLEILMKSNSTPATNKVPEATVFSK
SPVLLGQPNTLICFVDNIFPPAINITWLRNSKPVTEGTFETSFLSNPDHSFHKMAYLTFI
PSNDDIYDCKVEHWGLDEPVLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTIFII
QGLRSGGPSRHPGPL
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgccgctcagcagagctctgattttgggggtcctcgccctgaccaccatgctcagcccc
tgtggaggtcaagacgacattgaggccgaccacgtagccgcctatggtataaatatgtat
cagtattatgaatccagaggccagtacacacatgaatttgatggtgacgaggaattctat
gtggacttggataagaaggagaccatctggaggatccccgagtttggacaactgacaagc
tttgacccccaaggtggacttcaagagatagctacagcaaaatacaatttggaaatcctg
atgaagtcaaattcaaccccagctaccaacaaggttcctgaggcgaccgtgttttccaag
tcccctgtgctgctgggtcagcccaacaccctcatctgctttgtagacaacatctttcct
cctgcgatcaatatcacgtggttgagaaacagcaagccagtcacagaaggcacttttgag
accagcttcctctccaaccctgaccattccttccacaagatggcttacctcaccttcatc
ccttctaacgatgacatttatgactgcaaggtggagcactggggcctcgacgagccggtt
ctaaaacactgggaacctgagattccagcccccatgtcagagctgacagagactgtggtc
tgtgccctggggttgtctgtgggcctcgtgggcatcgtggtgggcaccatcttcatcatt
caaggcctgcggtcaggtggcccctccagacacccagggcccttgtga
DBGET
integrated database retrieval system