(Translated by
https://www.hiragana.jp/
)
KEGG T09718: 128384119
Scomber japonicus (chub mackerel): 128384119
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Entry
128384119 CDS
T09718
Name
(RefSeq) RLA class II histocompatibility antigen, DP alpha-1 chain-like
KO
K06752
MHC class II antigen
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04145
Phagosome
sjo04514
Cell adhesion molecules
sjo04672
Intestinal immune network for IgA production
sjo05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
128384119
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
128384119
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
128384119
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
128384119
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sjo04147
]
128384119
Exosome [BR:
sjo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
128384119
Exosomal proteins of epithelial cells
128384119
Exosomal proteins of breast milk
128384119
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C1-set
MHC_II_alpha
Ig_3
C2-set_2
Ig_2
C2-set_3
I-set
ig
Motif
Other DBs
NCBI-GeneID:
128384119
NCBI-ProteinID:
XP_053199674
LinkDB
All DBs
Position
22:28523510..28541402
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AA seq
276 aa
AA seq
DB search
MMKTMMKLMKMSELLLILSCVLCVSFCAKDHEDLAITGCSDSDGEKMFGLDGEEVWYADF
NKGKGVVALPPFAKPINFPGGYENALNGQQVCKSNLKNCRIGMKDIPLEYDPPSGHTLYS
RDEVELGVQNTLICHVTGFYPAPVKVDWTKNGKTVTEGTSINVPYPNKDGSFSQSSRLEF
IPQQGDMYSCSVSHPTLSKPLTRFWGEKVFTSVSRCGGVNVSVSRCGGVNVSVSRCGGVN
VSVSRCGGVNVSVCFLSPDVELLMFLCVFCLQMWRC
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagacgatgatgaagttgatgaagatgtcggagctgctcctcatcctctcctgt
gtcctctgtgtctccttctgtgcaaaagatcatgaggatcttgctatcactggatgttca
gactctgatggagagaagatgttcggactggatggagaagaggtgtggtacgcagacttc
aacaaagggaaaggagtagtggctctgcctccctttgctaagcctatcaacttcccagga
ggttatgaaaatgctctgaatggtcaacaggtctgcaaatcaaacctgaagaactgtcgt
attggaatgaaggacatcccactggaatatgatcctccttccggtcacaccctctactcc
agagacgaggtggagctcggagtccagaacacactgatctgtcatgtgaccggtttctat
cctgctcctgttaaagtcgactggaccaagaacggaaagaccgtgaccgaaggaaccagc
atcaatgttccttaccccaacaaagacggttccttcagtcagtcctccagactggagttc
atcccacagcagggagacatgtacagctgttcagtgtcacacccaacactgagcaaacca
ctgaccaggttctggggtgagaaagtctttacatctgtctccagatgtggaggtgttaat
gtttctgtctccagatgtggaggtgttaatgtttctgtctccagatgtggaggtgttaat
gtttctgtctccagatgtggaggtgttaatgtttctgtgtgttttctgtctccagatgtg
gagttgttaatgtttctgtgtgttttctgtctccagatgtggaggtgttaa
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