(Translated by
https://www.hiragana.jp/
)
KEGG T09921: 134307010
Trichomycterus rosablanca: 134307010
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Entry
134307010 CDS
T09921
Symbol
pdgfrb
Name
(RefSeq) platelet-derived growth factor receptor beta
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
trn
Trichomycterus rosablanca
Pathway
trn04010
MAPK signaling pathway
trn04020
Calcium signaling pathway
trn04510
Focal adhesion
trn04540
Gap junction
trn04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
134307010 (pdgfrb)
04020 Calcium signaling pathway
134307010 (pdgfrb)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
134307010 (pdgfrb)
04540 Gap junction
134307010 (pdgfrb)
09142 Cell motility
04810 Regulation of actin cytoskeleton
134307010 (pdgfrb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
trn01001
]
134307010 (pdgfrb)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
trn04090
]
134307010 (pdgfrb)
Enzymes [BR:
trn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
134307010 (pdgfrb)
Protein kinases [BR:
trn01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
134307010 (pdgfrb)
CD molecules [BR:
trn04090
]
Proteins
134307010 (pdgfrb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
Ig_2
ig
C2-set_2
VEGFR-1-like_5th
VEGFR-1-like_Ig-like
VEGFR1-3_N_Ig-like
RIFIN
Motif
Other DBs
NCBI-GeneID:
134307010
NCBI-ProteinID:
XP_062846492
LinkDB
All DBs
Position
1:23155154..23216619
Genome browser
AA seq
1081 aa
AA seq
DB search
MKEKHVNRFQLTLFIKALSLLLCSTASGLELNPNLKENILTANSSLSITCSGWSPVTWRY
KRDEKVPAFRTENRTLSSVLHLENVTWRHTGVYVCSEFATEESREVAIYVPDPEAWFLEN
EYNIVTRTKNEATIPCLVTDPHINVSLYEKYSDTPVAGKYVPTVGFTAILGDETYRCIGE
RNGEEKWSGLFHVFSIIVPEVLDAHINASKTVLKQGEPLSVNCMVPIVQLVYFSWDYPNK
ENVEILTDVSDQSDMRSCLNVSKTTLAHSGRYVCNAKEDINNQETSVSINITVLEKGFVK
LSSLLGSNVSALSYENVELKVEVEAYPKPVIRWSKDGVVITGDHNIKTKQEQETKYISTV
TLVRIRLEQKGFYTVHVSNEDDSKEMAFHVVVKVPPQITELSDYHLAGKKHAVTCVAEGV
PSPNIQWFSCESMHKCSNKGNKSAVWSPLVPDTDSISIETNTTYNETRKIHQVVSQVTFL
RPQQFSLRCQARNERGARARDIKLITSTLFSQVSVLAAVLALVVIAIIFLIILIAVWRKK
PRYEIRWKVIESVSQDGHEYIYVDPVHLPYDLTWEMPRDSLVLGRTLGSGAFGRVVEATA
CGFTHSQSSTKVAVKMLKSTARRSETQALMSELKIMSHLGPHLNIVNLLGACTKPGPLYL
VTEYCRYGDLVDYLHRNKQSFLQHYANKNPLLNSSDSHICVDSDTPSGKGYVSFGSTSDG
GYMDMRKEDKTEYVAMQELTDTIKYADIQPSPYESPYQQDIYQEQGHRVDLSLVISDSPV
LNYTDLVGFSFQVAKGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMHDNNY
ISKGNTFLPLKWMAPESIFHNLYTTLSDVWSYGILLWEIFTMGGTPYPDLPMNELFYNAL
KRGYRMTKPMHASEEIYEVMKKCWDEKFEKRPEFSFLVQAMGNMLTDGYKKRYSQVSDSF
LNSDHPAVVRTKPRMPAPFPDTLPNSSPPPAFPIRQSSTPNPCLDANMELETAPYNGYII
PLPDPKPEEGCQDVTMLTESPLSSVGSEAETASLEEPSTEPEHSETQKELPSTPSVEDSF
L
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaaaaacatgtcaaccgtttccaactgaccctcttcataaaagccctctcctta
ctgctgtgttcgactgcttctggtctggaactgaaccccaatctgaaagagaacatcctg
actgctaactcctccctctccatcacatgttctggctggtcacctgtcacctggcgctat
aagcgtgacgagaaggtaccggcattcaggacagaaaaccgtaccctctctagtgttctt
cacttggaaaatgtgacatggcgacatacaggagtgtatgtatgttctgagtttgccact
gaggagagtagggaggtggccatctatgtacctgaccctgaggcatggtttctggaaaat
gagtacaatatagtcaccagaacaaaaaatgaagcaacaatcccctgcctggtgacagat
ccacacataaacgtgtccctttatgaaaaatactcagacaccccagtggcaggcaagtat
gtacccactgtgggttttactgcaatacttggtgatgaaacctaccgatgcataggagaa
aggaatggagaggaaaagtggtccggccttttccacgtcttcagcatcatcgttcctgaa
gttttggacgcccacatcaatgcctcaaagacggtgctaaaacaaggcgagcctctcagt
gtcaactgcatggtccctatagttcagcttgtctacttctcctgggattacccgaacaaa
gagaatgtggagatcctgacagatgtatcggaccaatcggacatgcgctcatgcctgaac
gtttccaaaaccacactggcacactctggacgctacgtttgcaatgcaaaagaggacatc
aacaaccaggagacttctgtcagtatcaacattactgtcctggagaaaggttttgtaaag
ctaagctcattattgggttccaacgtatctgcactgtcgtatgagaatgtggaattaaaa
gtagaggtggaggcctaccccaaacctgtcatccgctggagcaaagacggagtcgtcatc
actggagaccataatatcaaaacaaaacaggaacaggagactaagtacatcagcacagta
actctggtgagaatccggctggagcagaaaggcttttacactgttcacgtttccaatgag
gatgattccaaagagatggcttttcatgttgtggtaaaagttcctcctcagataacagag
ctttcagattatcacctggcgggaaagaagcatgccgtcacctgtgtggcagagggggtt
ccatctcccaatatccagtggtttagctgcgaaagcatgcacaaatgtagcaataagggc
aataagagtgcagtgtggagccctctggtgcctgatacagacagcatcagcattgagacc
aacaccacctacaacgaaacacgcaagatccaccaagttgtcagccaggtcacattcctc
cgtcctcagcaatttagcctgcgctgccaggccaggaatgagagaggagctagggctcga
gatattaaactcattaccagcactctattctcacaggtgtctgtgctggctgctgttttg
gcattggttgtcatcgccatcattttccttattatcctcattgctgtgtggagaaagaag
ccacgatatgagatcaggtggaaggtaatagaatcagtgagccaggatgggcatgaatac
atctatgtggatcccgttcaccttccctatgacctgacatgggagatgccccgggacagc
cttgttcttggtcgtactcttggatcaggagcatttggaagagtcgtagaggcaactgca
tgtggattcactcattcccagtcttctacaaaagtggctgtgaaaatgctaaaatcgact
gctcgcagaagtgaaactcaggccttgatgtcagagctgaagattatgagtcacttgggt
ccccacctgaacattgtaaatttgctaggagcctgcacaaaaccaggtcctctgtacctg
gtgacagaatattgtcgttatggagacctggtggattacctgcacaggaacaagcagagc
tttctgcagcactacgccaacaagaacccacttttaaacagcagtgacagccacatctgt
gtcgactctgacacaccatctgggaaaggctacgtgtcatttggcagcacaagtgatggt
ggttatatggacatgagaaaggaagacaagactgaatatgtggccatgcaggagctcaca
gacaccattaaatatgcagatattcagccctccccatatgagtcaccatatcagcaggac
atctaccaagaacaaggtcacagagtggatctttccctggtaatcagtgattctccagtc
ttaaattacactgacctggtgggcttcagctttcaggtggccaaaggaatggagtttctg
gcctccaaaaattgtgttcatcgggacttggcagccagaaatgtcctgatctgtgagggg
aagctggtgaagatctgtgactttggacttgccagagatatcatgcatgacaacaactac
atatccaaaggcaatacattcctgcctctaaagtggatggccccagagagcatctttcat
aatctgtacactacactcagtgatgtctggtcttatggcattttgttgtgggaaattttc
acaatgggtggaacaccataccctgatcttcctatgaatgagctgttctataatgcacta
aagagagggtatcgcatgaccaagcccatgcatgcctcagaggaaatttatgaggttatg
aagaagtgctgggatgagaagtttgaaaagaggccagagttctcctttttggtccaggct
atggggaacatgctcacagacggctataaaaagaggtactcccaggtcagcgacagcttc
ttaaatagtgaccacccggctgtagtgcggaccaagcccaggatgcctgctccgttcccg
gatacactcccgaactcatcccctccgccagcattccctatccgccagtcgtccaccccc
aacccttgtctggatgctaatatggagttggaaacagcaccttacaatggttatatcatc
cctttaccagaccccaagcctgaggaggggtgccaggatgttaccatgttaacggaaagc
cccttgagctctgtgggttcagaggcagagacagcatctttggaagaacccagcacagag
ccggagcacagcgaaacccaaaaggaactccccagcactccaagtgtagaagacagcttc
ttgtga
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