(Translated by
https://www.hiragana.jp/
)
KEGG T01011: 780048
Xenopus tropicalis (tropical clawed frog): 780048
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Entry
780048 CDS
T01011
Symbol
grin1
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1 precursor
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04020
Calcium signaling pathway
xtr04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
780048 (grin1)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
780048 (grin1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xtr04040
]
780048 (grin1)
Ion channels [BR:
xtr04040
]
Ligand-gated channels
Glutamate (ionotropic)
780048 (grin1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Peripla_BP_6
Ion_trans_2
Rap-GAP_dimer
DUF6724
Motif
Other DBs
NCBI-GeneID:
780048
NCBI-ProteinID:
NP_001072593
Xenbase:
XB-GENE-494200
UniProt:
Q05B24
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Position
8:1606495..1657500
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AA seq
899 aa
AA seq
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MATMRLFLLAVLFLFSFARAGCDPKIVNIGAVLSTKKHEQIFREAVNQANKRHGTWKIQL
NATSVTHRPNAIQMALSVCEDLISSQVYAILVSHPPAPTDHLTPTPISYTAGFYRIPVIG
LTTRMSIYSDKSIHLSFLRTVPPYSHQALVWFEMMRLFNWNHVILIVSDDHEGRAAQKKL
ETLLEEKESKADKVLQFEPGTKNLTALLLEAKELEARVIILSASEDDATAVYKSAAMLDM
TGAGYVWLVGEREISGSALRYAPDGIIGLQLINGKNESAHISDAVAVAAQAIHELFEMEN
ITDPPRGCVGNTNIWKTGPLFKRVLMSSKYPDGVTGRIEFNEDGDRKFANYSIMNLQNRK
LVQVGIFNGSHVIQNDRKIIWPGGETERPQGYQMSTRLKIVTIHQEPFVYVKPTMTDGTC
REEYTINGDPIKKVICNGPNETIPGRPTVPQCCYGFCIDLLIKLAREMNFTYEVHLVADG
KFGTQERVNNSNKKEWNGMMGELLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILV
KKEIPRSTPDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALT
LSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEE
RITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHNYESAAEAIQAVR
DNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGIGMRKDSPWKQNVSLNILKSHEN
GFMEELDKTWVRYQECDSRSNAPATLTFENMAGVFMLVAGGIVAGIFLIFIEIAYKRHKD
ARRKQMQLAFAAVNVWRKNLQDRKSGRAEPDPKKKASFRSITSTLASSFKRRRSSKDTT
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atggccactatgcgccttttccttttggctgtactctttctgttctccttcgcccgggcc
ggatgtgaccccaaaatcgttaacatcggggcagtgctgagcaccaagaagcacgagcag
atcttccgggaagctgtaaaccaggcaaataaacgccacggcacctggaagatccagctc
aatgccacctctgtcacccaccgacccaatgccatccagatggctctctccgtgtgtgag
gatctcatctccagccaggtctacgccatattggttagtcaccctcctgcacccacggat
cacctgacgccaacgcctatatcctacacagcaggcttttaccggatcccagtcatcggg
ctgaccactcgcatgtctatatattccgataagagcatccacctctcgttcctacgcacg
gtgcccccctactcccaccaggccttggtttggttcgagatgatgcgcctgttcaactgg
aaccatgtcattctcatcgttagcgacgaccacgagggccgggccgctcagaaaaagctg
gagaccctcttagaggagaaagagtccaaggcagacaaagtcctgcagtttgaacctgga
accaaaaacctgacggccctcctccttgaggccaaggaactggaagccagagtcatcatc
ctctctgccagtgaggacgatgcaacggcggtgtacaaatcggcagcaatgctggacatg
accggcgccggctacgtctggttggtgggagagagggagatatccggaagtgcattgaga
tatgcgcccgatggaattattgggctgcagctgatcaatgggaagaacgagtcggcgcat
ataagcgacgcagtggctgtagcggcccaggcaatacacgagttatttgaaatggaaaac
attaccgaccccccgaggggctgcgttggaaacaccaatatatggaagactggacctctg
ttcaaaagggttctcatgtcctccaaataccccgacggggtaacaggaagaattgagttc
aatgaggacggagacaggaaatttgccaattacagcataatgaacctacagaaccgcaaa
ttggttcaggtcgggattttcaatggcagccatgttatacagaacgacagaaagattatt
tggcccggcggggaaacagagagaccacagggctatcaaatgtccacgaggttgaagata
gttaccatccaccaagaaccgtttgtatatgtgaagccaacaatgactgatggaacgtgc
agggaagaatacaccatcaatggagatcccatcaaaaaagttatttgtaacggtcccaat
gagaccatcccaggtcgcccgactgtaccccagtgctgctacggcttttgcattgacctg
cttatcaaacttgccagagaaatgaacttcacctacgaggttcacttggtagccgacggt
aaattcggcactcaggagcgggtcaataacagcaacaaaaaggagtggaacggcatgatg
ggagagttactgagcggccaagcagacatgatagtcgccccactcaccattaataatgag
cgggctcagtatattgagttctccaagccattcaagtaccaaggactcactatcctcgtg
aaaaaggaaatcccaaggagcactccggactcattcatgcagccgtttcagagcacactc
tggctgttggttggactctcggtgcatgtggtggcggtgatgttatacctactggatcga
ttcagtccgttcgggcgatttaaagtcaacagcgaagaggaagaggaagatgctttgaca
ctgtcttcagccatgtggttttcctggggggtcctcttgaactctggtattggagaaggg
gctcccaggagtttctctgcccgaatccttggcatggtctgggctggattcgctatgatt
attgtagcctcctacactgccaacctggctgccttcctggtgttggacaggccagaggag
aggataactggcattaatgatccccggctgcgcaaccccagtgacaagtttatctacgcc
accgtcaagcaaagctctgtggacatatatttccggagacaggtagaactcagcaccatg
tacagacacatggaaaagcacaactacgagagcgcagcggaagccatacaagctgtgcgg
gacaacaaactgcatgcgtttatatgggactcggccgtgctggagtttgaggcctctcag
aagtgtgaccttgttaccaccggtgaattgttcttccgctccggcttcggcattggcatg
agaaaagacagcccctggaaacagaacgtctcactcaacatcctaaagtcccacgagaac
ggctttatggaagagctggataagacctgggtcaggtaccaggagtgcgattcccgcagc
aatgccccagccacactgacctttgagaacatggcaggggtcttcatgctggtcgctggg
ggcattgttgccggaatctttttgatattcattgagattgcctacaagcggcacaaggat
gcccgcaggaagcagatgcagttggcctttgctgccgttaacgtatggagaaaaaacctg
caggatagaaaaagtggtagagcagaacctgaccctaaaaagaaagcctcttttaggtcc
atcacctccaccctggcctccagcttcaagagacgtaggtcctccaaagacacgacataa
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