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Anatomy - brain-map.org
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Anatomy

Among our most widely cited resources, these neuroanatomical atlases include mouse brain & spinal cord, and human brain across multiple developmental timepoints. Below are resources for our reference atlases and accompanying software tools.

Reference Atlases

High resolution anatomical reference atlases and histology for mouse and human.

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Explore the Mouse Atlas/CCF

Common Coordinate Framework (CCFv3) is a 3D reference space by creating an average brain at 10um voxel resolution.

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Programmatic Access

Use the API and Python SDK to access reference data programmatically.

Explore

The Allen Institute for Brain Science uses a unique approach to generate data, tools and knowledge for researchers to explore the biological complexity of the mammalian brain. This portal provides access to high quality data and web-based applications created for the benefit of the global research community.

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