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MIT Laboratory for Computational Physiology · GitHub
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MIT Laboratory for Computational Physiology

Research on improving health care through data analysis, including use of MIMIC-III and other data sources

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  1. mimic-code mimic-code Public

    MIMIC Code Repository: Code shared by the research community for the MIMIC family of databases

    Jupyter Notebook 2.5k 1.5k

  2. wfdb-python wfdb-python Public

    Native Python WFDB package

    Jupyter Notebook 734 298

  3. eicu-code eicu-code Public

    Code and website related to the eICU Collaborative Research Database

    Jupyter Notebook 306 213

  4. mimic-iv mimic-iv Public archive

    Deprecated. For the latest MIMIC-IV code, please refer to: https://github.com/MIT-LCP/mimic-code

    Python 262 92

  5. mimic-cxr mimic-cxr Public archive

    Code, documentation, and discussion around the MIMIC-CXR database

    Jupyter Notebook 252 54

  6. mimic-omop mimic-omop Public

    Mapping the MIMIC-III database to the OMOP schema

    PLpgSQL 126 47

Repositories

Showing 10 of 80 repositories
  • physionet-build Public

    The new PhysioNet platform.

    MIT-LCP/physionet-build’s past year of commit activity
    JavaScript 54 BSD-3-Clause 20 396 25 Updated Aug 23, 2024
  • mimic-code Public

    MIMIC Code Repository: Code shared by the research community for the MIMIC family of databases

    MIT-LCP/mimic-code’s past year of commit activity
    Jupyter Notebook 2,480 MIT 1,501 220 18 Updated Aug 22, 2024
  • bst209-2024 Public

    Course materials for BST209

    MIT-LCP/bst209-2024’s past year of commit activity
    HTML 3 MIT 1 0 0 Updated Aug 13, 2024
  • plibflac Public

    Read and write FLAC audio files in Python

    MIT-LCP/plibflac’s past year of commit activity
    C 0 GPL-3.0 0 0 0 Updated Aug 9, 2024
  • wfdb-python Public

    Native Python WFDB package

    MIT-LCP/wfdb-python’s past year of commit activity
    Jupyter Notebook 734 MIT 298 70 (1 issue needs help) 10 Updated Jul 30, 2024
  • mimic-website Public

    Website for the MIMIC Critical Care Database (currently version MIMIC-III)

    MIT-LCP/mimic-website’s past year of commit activity
    CSS 100 MIT 107 30 4 Updated Jun 26, 2024
  • hack-aotearoa Public

    Sample code for Hack Aotearoa 2023

    MIT-LCP/hack-aotearoa’s past year of commit activity
    Jupyter Notebook 9 MIT 6 0 2 Updated Jun 17, 2024
  • sccm-datathon Public

    Resources for the Society of Critical Care Medicine (SCCM) Datathon

    MIT-LCP/sccm-datathon’s past year of commit activity
    Jupyter Notebook 20 MIT 9 0 2 Updated Jun 17, 2024
  • bidmc-datathon Public

    Materials for the BIDMC datathon (Sat 29 Feb 2020)

    MIT-LCP/bidmc-datathon’s past year of commit activity
    Jupyter Notebook 11 MIT 3 0 2 Updated Jun 17, 2024
  • datathon-package Public

    Pip installable package containing helper functions for datathons

    MIT-LCP/datathon-package’s past year of commit activity
    Python 5 MIT 1 0 2 Updated Jun 17, 2024

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