A comprehensive tutorial about GWAS and PRS
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Updated
Apr 1, 2023
A comprehensive tutorial about GWAS and PRS
An R package to analyse and visualise admixture proportions from STRUCTURE, fastSTRUCTURE, TESS, ADMIXTURE etc.
R package and web app for spatial visualisation of admixture on a projected map
rhierbaps: R implementation of hierBAPS
strataG is a toolkit for haploid sequence and multilocus genetic data summaries, and analyses of population structure.
Tutorial for visualising admixture on a map
Mutual nearest neighbor graphs for population structure inference and visualization 🐙
A flexible tool for the multi-resolution localization of causal variants across the genome, accounting for population structure.
starmie: plotting and inference for population structure models 🌟
Scripts for file processing and analysis in phylogenetics and phylogeography
R implementation of the BAPS software for Bayesian Analysis of Population Structure
R is nowadays probably the most powerful tool for calculations of all kinds. There are plenty of modules available for work with molecular data. Those will be introduced during the course.
An integrated pipeline for analysis and visualization of Population Structure and Relatedness based on genome-wide genetic variant data
vk.com community members sex and age distribution (population pyramid)
Interactive interface for pophelper using shiny web framework.
A data clustering package based on admixture ratios (Q matrix) of population structure analysis.
R-markdown script for geographic population genetic structure analysis with Tess3r
Imputation and Admixture for lcWGS in one goal
This study assessed the spatial genetic variation in P. falciparum populations in Mali
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