Nonlinear control of transcription through enhancer–promoter interactions J Zuin, G Roth, Y Zhan, J Cramard, J Redolfi, E Piskadlo, P Mach, ... Nature 604 (7906), 571-577, 2022 | 287 | 2022 |
Easy quantification of template-directed CRISPR/Cas9 editing EK Brinkman, AN Kousholt, T Harmsen, C Leemans, T Chen, J Jonkers, ... Nucleic acids research 46 (10), e58-e58, 2018 | 207 | 2018 |
Impact of chromatin context on Cas9-induced DNA double-strand break repair pathway balance R Schep, EK Brinkman, C Leemans, X Vergara, RH van der Weide, ... Molecular cell 81 (10), 2216-2230. e10, 2021 | 159 | 2021 |
Promoter-intrinsic and local chromatin features determine gene repression in LADs C Leemans, MCH van der Zwalm, L Brueckner, F Comoglio, T van Schaik, ... Cell 177 (4), 852-864. e14, 2019 | 143 | 2019 |
Local rewiring of genome–nuclear lamina interactions by transcription L Brueckner, PA Zhao, T van Schaik, C Leemans, J Sima, ... The EMBO Journal 39 (6), e103159, 2020 | 71 | 2020 |
Automatically visualise and analyse data on pathways using PathVisioRPC from any programming environment A Bohler, LMT Eijssen, MP van Iersel, C Leemans, EL Willighagen, ... Bmc Bioinformatics 16, 1-12, 2015 | 18 | 2015 |
Widespread chromatin context-dependencies of DNA double-strand break repair proteins X Vergara, AG Manjón, M de Haas, B Morris, R Schep, C Leemans, ... Nature Communications 15 (1), 5334, 2024 | 5 | 2024 |
Protocol: A Multiplexed Reporter Assay to Study Effects of Chromatin Context on DNA Double-Strand Break Repair R Schep, C Leemans, EK Brinkman, T van Schaik, B van Steensel Frontiers in Genetics 12, 785947, 2022 | 2 | 2022 |
Genome-nuclear lamina interactions are multivalent and cooperative L Dauban, M Eder, M de Haas, VH Franceschini-Santos, JO Yanez-Cuna, ... bioRxiv, 2024.01. 10.574825, 2024 | 1 | 2024 |
Defining the fine structure of promoter activity on a genome-wide scale with CISSECTOR VD FitzPatrick, C Leemans, J van Arensbergen, B van Steensel, ... Nucleic Acids Research 51 (11), 5499-5511, 2023 | 1 | 2023 |
Chromatin protein complexes involved in gene repression in lamina-associated domains SG Manzo, A Mazouzi, C Leemans, T van Schaik, N Neyazi, ... The EMBO Journal, 1-28, 2024 | | 2024 |
Predicting the DNA binding specificity of mutated transcription factors using family-level biophysically interpretable machine learning S Liu, P Gomez-Alcala, C Leemans, WJ Glassford, RS Mann, ... bioRxiv, 2024 | | 2024 |
Functional maps of a genomic locus reveal confinement of an enhancer by its target gene. M Eder, CJI Moene, L Dauban, C Leemans, B van Steensel bioRxiv, 2024.08. 26.609360, 2024 | | 2024 |
Promoter-intrinsic and local chromatin features determine gene repression in lamina-associated domains C Leemans, B van Steensel, F Comoglio, L Pagie OSF, 2019 | | 2019 |
Supplementary Dataset S3. SuRE activity of annotated enhancers. C Leemans, B van Steensel, F Comoglio, L Pagie OSF, 2019 | | 2019 |
Lab notebook extract: TRIP analysis of escaper and repressed promoters B van Steensel, C Leemans, F Comoglio, L Pagie OSF, 2019 | | 2019 |
The BridgeDb framework E Willighagen, J Mélius, C Brenninkmeijer, S Soiland-Reyes, A Bohler, ... ECCB 2016, The Hague, 2016 | | 2016 |
SUPPLEMENTAL FIGURES VD FitzPatrick, C Leemans, J van Arensbergen, B van Steensel, ... | | |