(Translated by
https://www.hiragana.jp/
)
KEGG T05605: 112238726
Oncorhynchus tshawytscha (Chinook salmon): 112238726
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Entry
112238726 CDS
T05605
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C-like
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04020
Calcium signaling pathway
otw04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
112238726
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
112238726
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
otw04040
]
112238726
Ion channels [BR:
otw04040
]
Ligand-gated channels
Glutamate (ionotropic)
112238726
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
NMDAR2_C
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
112238726
NCBI-ProteinID:
XP_042161163
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All DBs
Position
LG24:22585339..22644921
Genome browser
AA seq
1382 aa
AA seq
DB search
SPLLSRPLILHPSINVAVMFSGSAYQNEVRGRLSRENFADLPLEVNPVTVLVNDTNPRAL
LTRLCQTMATEKLHGVVFEDDVGSGAGPQILDFLSTQTALPIIGISGGSAVVIPHKAEGS
TFLQMGASLEQQIVCMFKLMEEYDWGDFVVITSMLPGYETFVDYVRSYTDTSYFLWRLQD
ILSLEMSIGTSDVRAKRMLQQIDSQVLVAYCSHEEAQYLFQVAGEVGLLGPGYIWILPSL
ALGNTESPSPSSFPIGVIGVITDQWRKSLRQRVREGVAIVAKGAESFKRHQGFVPEGHSD
CNTPVTHINNNTLFRHMLNVTWERKDLSFNSDGYLTNPSMVIIALNRDRQWDKVGTLERG
ILQVRYPVWPRYGSFLEPVSDDRHLTVATLEERPFVIVENVDPDTGTCVRNTVPCRRQSN
RTESLVGHSEPYTKLCCKGFCIDILKKLSRTIKFSYDLYLVTNGKHGKMISGIWNGMIGE
VFYRKADMAIGSLTINEERSEIIDFSVPFVETGISVMVARSNGTVSPSAFLEPYSPAVWV
MMFVMCLTVVAVTVFVFEYFSPVGYNRSLVSAKAAGGPTFTIGKSVWLLWGIVFNNSVPI
ENPKGTTSKIMVLVWAFFAVIFLASYTANLAAFMIQEQYIDTVSGLSDKKFQKPQEHYPP
FRFGTVPNGSTERNIRSNYPDMHAHMVKYNQKGVEDALNSLKTAKLDAFIYDAAVLNYMA
GKDEGCKLVTIGSGKVFATTGYGIALQKDSRWKRPIDLALLQFLGDGDTQRLETVWLSGI
CQNEKNEVMSSKLDIDNMAGVFYMLLVAMGLSLLVFSWEHLLYWKLHKELDKSPRMDFLL
AISRGIYSCFNGVEEPDLPNLANPDLTANYAQANMLKMLRTAKDLVNSAQVETSLDHASK
TIEHWGRHGGSLPVHIPQQGTTETVPGGFAYVTENTHLPPERPLSPQYCTLGVVTSVNQQ
RGLARPTPLRYTLPARTSSLYDRPLPVSSLICPHLDLAGGDRLSSYLHPSTGRLYVEPQH
LSHPRSPFIPYSELQLPDIYLSSHPPSAVSHPPHTEPSKRKRRSKSLLSGETGRGGGQRR
RRREEKTVCLAELRANHLQENHVSPHMPDSLYPGAVLCPGEEGCGGSWPLPLEELVLAGR
RRRHRRPSFLRATWGSEQIRQPDDTPPTSLDSQSHSALPDLFPRVMVDQETPTKLYNPTP
FRNNLCYPAASPRQHAYLHIRQDQRKGNSRKKLRHSHSTHLPTYREAVLGGQGGGGGVGL
GVVRRTTSLLSRQYNDYLTSYPGLPLYHSPLNFQTHSPASSNHPSPCTYRIPSPVCQLLA
CGGGCRSQRGLLYQDSLYGAYGGAQDPDIEPQRGEGLVGLRSEDRPCVTRPWGKVSSLES
EV
NT seq
4149 nt
NT seq
+upstream
nt +downstream
nt
tctcccctcctctcccgtcctctcatcctccatccttctattaatgtagcagtaatgttc
agtggctctgcttaccagaatgaggtcaggggtcgtttgagcagagagaacttcgctgat
cttcccctagaggtgaacccggtcactgttctggttaatgacaccaaccctcgggccctg
ctgacgcgtctctgtcaaaccatggccacagagaaactgcatggagtcgtgttcgaggac
gatgtgggatcaggagctggacctcagatcctggacttcctgtcgactcagacagctcta
cccatcattggcatcagtggaggatctgccgttgtcatacctcacaaggctgagggttcc
acgttcctccagatgggtgcatcactggaacagcagattgtctgcatgttcaagttgatg
gaggagtatgactggggagactttgtagtcatcacaagtatgttgccgggatacgagacg
tttgtggactacgtccgctcctacacggacacttcctacttcctgtggaggctgcaggat
atcctgtctctggagatgtctatcgggaccagcgacgtccgcgccaaacgcatgttacag
cagattgattcccaggtactcgtagcctactgctcccatgaagaggcccagtacctgttc
caggtagcaggggaggtgggtctattggggcctggctacatctggatcctcccctccctc
gcgttgggcaacacagagagcccttcacctagcagcttccccataggagtgattggcgtc
atcaccgaccagtggaggaagagcctgaggcagcgggtcagagagggagtggccatagtg
gccaaaggggcggagagtttcaagaggcatcaggggttcgttcccgagggacacagcgac
tgcaacacaccagttacacacattaacaacaacacactgttcagacacatgctgaacgtg
acatgggagcgtaaggacctgtcgtttaatagtgacggttacctgacaaacccttccatg
gtcatcatcgctttgaacagagacagacagtgggacaaggtggggacattagagcggggt
atcctccaggtgcgttatccggtgtggcctcgatatggtagtttcctcgagccggtatca
gatgatcgccacctgacggtagccactctggaggagaggcccttcgtcatcgtagagaac
gtggaccccgacacgggaacctgtgtacgcaacaccgtgccctgccgacgccagtccaac
cgcaccgagagtcttgtgggtcactcggagccctacaccaagctgtgctgtaaggggttc
tgcatcgacattctgaagaagctgtctcgcaccatcaagttctcctacgacctctacctg
gtcactaacgggaaacatggaaagatgatcagcggcatctggaacggcatgatcggagag
gtgttctacaggaaagcagacatggccataggttctctcaccataaatgaggagcgttct
gagatcatcgacttctccgtgccattcgtcgagaccggcatcagcgtcatggttgcccgt
agcaatgggactgtctccccctccgccttcctcgagccctatagcccagcggtgtgggtg
atgatgtttgtaatgtgcctgaccgtggtagctgtgaccgtattcgtgttcgagtacttc
agtcctgtcggctacaaccgcagcttggtcagcgctaaagcggcaggaggtcctaccttc
accatagggaagtcagtgtggttgctttggggcatcgtgttcaataactcagtccccatc
gagaaccctaaaggaaccaccagtaagatcatggtgctggtgtgggccttcttcgcggtc
atcttcctggcctcctacaccgccaacctggctgccttcatgatccaggagcagtacata
gacactgtgtctggactgtctgacaagaagttccagaagcctcaggaacactaccctcca
ttccggtttgggacggtccctaacggcagcacagagaggaacatcaggagtaactacccc
gacatgcacgcacacatggtcaaatacaaccagaaaggagtggaggatgccctcaacagc
cttaagacggcgaagctggatgcttttatctatgatgctgcggtgttgaactacatggca
gggaaggacgagggctgtaagcttgtgactattggctctgggaaggtgtttgctacaacg
ggctatggtatcgccctgcagaaagactctcgatggaaacgaccaattgacctggcctta
ttgcagttcctgggagatggtgacacccagcgcttggagacagtctggctgtcaggcatc
tgtcagaatgagaagaacgaggtgatgagcagtaagctggacatagacaacatggccggg
gtcttctacatgctgctggtggccatggggctcagtctgctggtgttctcctgggaacat
ctactctactggaaactgcacaaggaactagacaaatctcccaggatggacttcctgctc
gccatcagcaggggtatctacagttgcttcaacggggtggaggaaccagacctccctaac
ctggccaacccagacctgacagctaactatgcccaggctaacatgctcaagatgctacgc
actgctaaggacctggttaactccgcccaagtcgagacctcactggaccacgcctccaag
accatagaacactggggacgccatggcggcagcctgccagtccacattccgcagcaaggc
accacggaaacagtcccgggagggttcgcttatgtcacagagaatacacacctgcccccc
gagcgccccctcagcccacaatactgcacgctgggtgtagtgacatctgtgaaccagcag
agggggcttgcgagacccacaccgctacgatacacgctcccggctcgtacttcctctctc
tacgacagaccacttcctgtttctagtctcatttgccctcaccttgacctggctgggggg
gaccgcctctcttcttatcttcacccatccacaggtaggctctatgtggaaccccaacac
ctttcccacccccgctctcctttcatcccctatagtgagctccagctcccagacatctac
ctctcctctcacccaccctctgctgtctcccatcccccccacacagagccctccaagagg
aagaggaggagcaagagcctcctctcaggggagacaggaagaggaggaggacagaggagg
cggcgcagggaggagaagacggtgtgcctggctgaactccgggccaaccacctccaggaa
aaccacgtctcgccccacatgcctgactccctgtacccaggagcggtgctctgtcctggg
gaagagggatgcggtggctcctggcctcttcctctggaggagctcgtcctagcaggcaga
cggcggcgccaccgtcggccatctttccttcgagccacctggggcagtgagcagattcgc
cagccggacgatactccgcctacatccctcgatagccaatcacattctgctttaccagac
ttatttccccgcgtcatggtcgaccaagaaactcccactaaactctacaaccccacccca
ttccggaacaacctatgctatcctgccgcctcaccccgccaacatgcctatcttcatata
aggcaggaccagaggaaaggaaactcacgtaagaagctgcggcactcacactccacccac
ctgcccacctacagggaggccgtgctggggggccagggagggggaggtggggtaggcctg
ggggtggtccggagaaccaccagcctgctcagcagacagtacaatgactatctaacctcc
taccctgggctgcctctataccacagccccctcaacttccagacccattccccagcgtcc
agcaaccaccccagcccctgtacctaccgtatccccagccctgtatgccagctcctggcc
tgtggaggtggctgtcgaagtcagagggggttgttgtaccaggacagtctgtatggagcc
tatggaggggcccaggatccggacatagagccccagagaggagagggcttggtagggttg
aggtctgaggacagaccctgtgtgactcggccctggggaaaagtctctagtctggagtca
gaggtctga
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