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Taxonomy browser (Chryseobacterium)

Chryseobacterium

Taxonomy ID: 59732 (for references in articles please use NCBI:txid59732)
current name
Chryseobacterium Vandamme et al. 1994 in [Vandamme P et al. (1994)]
homotypic synonym:
Chryseobacterium Vandamme et al. 1994 emend. Kämpfer et al. 2009, emended name 1)
Chryseobacterium Vandamme et al. 1994 emend. Wu et al. 2013, emended name 2)
Chryseobacterium Vandamme et al. 1994 emend. Montero-Calasanz et al. 2014, emended name 3)
Chryseobacterium Vandamme et al. 1994 emend. Chen et al. 2015, emended name 4)
Chryseobacterium Vandamme et al. 1994 emend. Hahnke et al. 2016, emended name 5)
Chryseobacterium Vandamme et al. 1994 emend. Heidler von Heilborn et al. 2022, emended name 6) in [Heidler von Heilborn D et al. (2022)]
NCBI BLAST name: CFB group bacteria
Rank: genus
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic synonym
Planobacterium Peng et al. 2009
Lineage( full )
cellular organisms; Bacteria; FCB group; Bacteroidota/Chlorobiota group; Bacteroidota; Flavobacteriia; Flavobacteriales; Weeksellaceae; Chryseobacterium group
   Entrez records   
Database name Subtree links Direct links
Nucleotide 82,725 5
Protein 2,296,992 100,045
Structure 15 -
Genome 123 1
Popset 675 667
Conserved Domains 1 1
GEO Datasets 16 -
PubMed Central 3,837 3,520
Gene 56,778 -
SRA Experiments 420 46
Protein Clusters 3,825 3,084
Identical Protein Groups 1,546,133 100,052
BioProject 517 16
BioSample 1,156 54
Assembly 842 -
PubChem BioAssay 12 -
Taxonomy 1,806 1

Notes:

Comments and References:

Vandamme P et al. (1994)
Vandamme, P., Bernardet, J.F., Segers, P., Kersters, K., and Holmes, B. "New perspectives in the classification of the Flavobacteria: description of Chryseobacterium gen. nov., Bergeyella gen. nov., and Empedobacter nom. rev." Int. J. Syst. Bacteriol. (1994) 44(4):827-831.
Heidler von Heilborn D et al. (2022), PubMed: abstract
Heidler von Heilborn, D., Nover, L., Weber, M., Hölz,l .G, Gisch, N., Waldhans, C., Mittler, M., Kreyenschmidt, J., Woehle, C., Hüttel, B., and Lipski, A. "Polar lipid characterization and description of Chryseobacterium capnotolerans sp. nov., isolated from high CO2-containing atmosphere and emended descriptions of the genus Chryseobacterium, and the species C. balustinum, C. daecheongense, C. formosense, C. gleum, C. indologenes, C. joostei, C. scophthalmum and C. ureilyticum." Int. J. Syst. Evol. Microbiol. (2022) 72(5):005372.
Planobacterium (LPSN link)
Hahnke RL et al. (2016)
Hahnke, R.L., Meier-Kolthoff, J.P., García-López, M., Mukherjee, S., Huntemann, M., Ivanova, N.N., Woyke, T., Kyrpides, N.C., Klenk, H.-P., and Göker, M. "Genome-based taxonomic classification of Bacteroidetes." Front. Microbiol. (2016) 7:2003.
Holmes B et al. (2013)
Holmes, B., Steigerwalt, A.G., and Nicholson, A.C. "DNA-DNA hybridization study of strains of Chryseobacterium, Elizabethkingia and Empedobacter and of other usually indole-producing non-fermenters of CDC groups IIc, IIe, IIh and IIi, mostly from human clinical sources, and proposals of Chryseobacterium bernardetii sp. nov., Chryseobacterium carnis sp. nov., Chryseobacterium lactis sp. nov., Chryseobacterium nakagawai sp. nov. and Chryseobacterium taklimakanense comb. nov." Int. J. Syst. Evol. Microbiol. (2013) 63:4639-4662.
Kämpfer P et al. (2009f)
Kämpfer, P., Lodders, N., Vaneechoutte, M., and Wauters, G. "Transfer of Sejongia antarctica, Sejongia jeonii and Sejongia marina to the genus Chryseobacterium as Chryseobacterium antarcticum comb. nov., Chryseobacterium jeonii comb. nov. and Chryseobacterium marinum comb. nov." Int. J. Syst. Evol. Microbiol. (2009) 59:2238-2240.
Kämpfer P et al. (2009g)
Kämpfer, P., Vaneechoutte, M., Lodders, N., De Baere, T., Avesani, V., Janssens, M., Busse, H.-J., and Wauters, G. "Description of Chryseobacterium anthropi sp. nov. to accommodate clinical isolates biochemically similar to Kaistella koreensis and Chryseobacterium haifense, proposal to reclassify Kaistella koreensis as Chryseobacterium koreense comb. nov. and emended description of the genus Chryseobacterium." Int. J. Syst. Evol. Microbiol. (2009) 59:2421-2428.
List of Changes in Taxonomic Opinion No. 21 (2015)
"Notification of changes in taxonomic opinion previously published outside the IJSEM." Int. J. Syst. Evol. Microbiol. (2015) 65(1):7-10.
List of Changes in Taxonomic Opinion No. 22 (2015)
"Notification of changes in taxonomic opinion previously published outside the IJSEM." Int. J. Syst. Evol. Microbiol. (2015) 65:2028-2029.
List of Changes in Taxonomic Opinion No. 26 (2017)
"Notification of changes in taxonomic opinion previously published outside the IJSEM." Int. J. Syst. Evol. Microbiol. (2017) 67(7):2081-2086.
Montero-Calasanz M del C et al. (2014b)
Montero-Calasanz, M. del C., Göker, M., Rohde, M., Spröer, C., Schumann, P., Busse, H.-J., Schmid, M., Klenk, H.-P., Tindall, B.J., and Camacho, M. "Chryseobacterium oleae sp. nov., an efficient plant growth promoting bacterium in the rooting induction of olive tree (Olea europaea L.) cuttings and emended descriptions of the genus Chryseobacterium, C. daecheongense, C. gambrini, C. gleum, C. joostei, C. jejuense, C. luteum, C. shigense, C. taiwanense, C. ureilyticum and C. vrystaatense." Syst. Appl. Microbiol. (2014) 37:342-350.
Nicholson AC et al. (2020)
Nicholson, A.C., Gulvik, C.A., Whitney, A.M., Humrighouse, B.W., Bell, M.E., Holmes, B., Steigerwalt, A.G., Villarma, A., Sheth, M., Batra, D., Rowe, L.A., Burroughs, M., Pryor, J.C., Bernardet, J.-F., Hugo, C., Kampfer, P., Newman, J.D., and McQuiston, J.R. "Division of the genus Chryseobacterium: Observation of discontinuities in amino acid identity values, a possible consequence of major extinction events, guides transfer of nine species to the genus Epilithonimonas, eleven species to the genus Kaistella, and three species to the genus Halpernia gen. nov., with description of Kaistella daneshvariae sp. nov. and Epilithonimonas vandammei sp. nov. derived from clinical specimens." Int. J. Syst. Evol. Microbiol. (2020) 70(8):4432-4450.
Vandamme P et al. (1994)
Vandamme, P., Bernardet, J.F., Segers, P., Kersters, K., and Holmes, B. "New perspectives in the classification of the Flavobacteria: description of Chryseobacterium gen. nov., Bergeyella gen. nov., and Empedobacter nom. rev." Int. J. Syst. Bacteriol. (1994) 44(4):827-831. [No PubMed record available.]
Wu YF et al. (2013)
Wu, Y.-F., Wu, Q.-L., and Liu, S.-J. "Chryseobacterium taihuense sp. nov., isolated from a eutrophic lake, and emended descriptions of the genus Chryseobacterium, Chryseobacterium taiwanense, Chryseobacterium jejuense and Chryseobacterium indoltheticum." Int. J. Syst. Evol. Microbiol. (2013) 63:913-919.
Peng F et al. (2009b)
Peng, F., Liu, M., Zhang, L., Dai, J., Luo, X., An, H., and Fang, C. "Planobacterium taklimakanense gen. nov., sp. nov., a member of the family Flavobacteriaceae that exhibits swimming motility, isolated from desert soil." Int. J. Syst. Evol. Microbiol. (2009) 59:1672-1678.
Chen XY et al. (2015)
Chen, X.Y., Zhao, R., Chen, Z.L., Liu, L., Li, X.D., and Li, Y.H. "Chryseobacterium polytrichastri sp. nov., isolated from a moss (Polytrichastrum formosum), and emended description of the genus Chryseobacterium." Antonie van Leeuwenhoek (2015) 107:403-410.
Chryseobacterium (LPSN link)

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Chryseobacterium taxonomy/phylogenetic Lifemap
LBSN taxonomy/phylogenetic List of Bacterial names with Standing in Nomenclature
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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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