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GRIN2C glutamate ionotropic receptor NMDA type subunit 2C [Pseudopodoces humilis (Tibetan ground-tit)] - Gene - NCBI
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GRIN2C glutamate ionotropic receptor NMDA type subunit 2C [ Pseudopodoces humilis (Tibetan ground-tit) ]

Gene ID: 102102883, updated on 3-Aug-2024

Summary

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Gene symbol
GRIN2C
Gene description
glutamate ionotropic receptor NMDA type subunit 2C
Gene type
protein coding
RefSeq status
MODEL
Organism
Pseudopodoces humilis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Paridae; Pseudopodoces
Orthologs
human mouse all
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Genomic context

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See GRIN2C in Genome Data Viewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
101 current PseHum1.0 (GCF_000331425.1) Unplaced Scaffold NW_005087586.1 (3907323..3921633, complement)

NW_005087586.1Genomic Context describing neighboring genes Neighboring gene N-acetyltransferase 9 Neighboring gene transmembrane protein 104 Neighboring gene ferredoxin reductase Neighboring gene fatty acid desaturase 6

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005087586.1 Unplaced Scaffold Reference PseHum1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NMDA glutamate receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in excitatory postsynaptic potential IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in long-term synaptic potentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in monoatomic ion transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in synaptic transmission, glutamatergic IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of NMDA selective glutamate receptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in postsynaptic density membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in postsynaptic membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glutamate receptor ionotropic, NMDA 2C

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pseudopodoces humilis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PseHum1.0 Primary Assembly

Genomic

  1. NW_005087586.1 Reference PseHum1.0 Primary Assembly

    Range
    3907323..3921633 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014255737.1 → XP_014111212.1  glutamate receptor ionotropic, NMDA 2C

    Conserved Domains (5) summary
    cd06378
    Location:32 → 391
    PBP1_iGluR_NMDA_NR2; N-terminal leucine/isoleucine/valine-binding protein (LIVBP)-like domain of the NR2 subunit of NMDA receptor family
    COG0834
    Location:459 → 542
    HisJ; ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Amino acid transport and metabolism, Signal transduction mechanisms]
    cd13718
    Location:402 → 803
    PBP2_iGluR_NMDA_Nr2; The ligand-binding domain of the NR2 subunit of ionotropic NMDA (N-methyl-D-aspartate) glutamate receptors, a member of the type 2 periplasmic binding fold protein superfamily
    pfam00060
    Location:557 → 829
    Lig_chan; Ligand-gated ion channel
    pfam10565
    Location:840 → 915
    NMDAR2_C; N-methyl D-aspartate receptor 2B3 C-terminus
Nucleotide Protein
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