(Translated by https://www.hiragana.jp/)
LOC122911197 HLA class II histocompatibility antigen, DO beta chain [Neogale vison (American mink)] - Gene - NCBI
U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC122911197 HLA class II histocompatibility antigen, DO beta chain [ Neogale vison (American mink) ]

Gene ID: 122911197, updated on 22-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
LOC122911197
Gene description
HLA class II histocompatibility antigen, DO beta chain
Gene type
protein coding
RefSeq status
MODEL
Organism
Neogale vison
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Mustelinae; Neogale
Also known as
DOB
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC122911197 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
7
Annotation release Status Assembly Chr Location
100 current ASM_NN_V1 (GCF_020171115.1) 1 NC_058091.1 (119612053..119620338)

Chromosome 1 - NC_058091.1Genomic Context describing neighboring genes Neighboring gene proteasome 20S subunit beta 8 Neighboring gene transporter 2, ATP binding cassette subfamily B member Neighboring gene HLA class II histocompatibility antigen, DQ beta 1 chain Neighboring gene HLA class II histocompatibility antigen, DQ alpha 2 chain-like Neighboring gene creatine kinase B-type-like

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_058091.1 Chromosome 1 Reference ASM_NN_V1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables MHC class II protein complex binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in antigen processing and presentation of exogenous peptide antigen via MHC class II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in immunoglobulin production involved in immunoglobulin-mediated immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in peptide antigen assembly with MHC class II protein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of T cell activation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of MHC class II protein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
HLA class II histocompatibility antigen, DO beta chain

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Neovison vison Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM_NN_V1 Primary Assembly

Genomic

  1. NC_058091.1 Reference ASM_NN_V1 Primary Assembly

    Range
    119612053..119620338
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044255662.1 → XP_044111597.1  HLA class II histocompatibility antigen, DO beta chain

    UniProtKB/TrEMBL
    A0A8C7EKQ8
    Conserved Domains (2) summary
    smart00921
    Location:39 → 110
    MHC_II_beta; Class II histocompatibility antigen, beta domain
    smart00407
    Location:141 → 209
    IGc1; Immunoglobulin C-Type
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.