Uncovering the role of 5-hydroxymethylcytosine in the epigenome (Q37956118)

25 August 2017

title

Uncovering the role of 5-hydroxymethylcytosine in the epigenome (English)

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25 August 2017

3

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25 August 2017

Miguel R Branco

1

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author name string

Gabriella Ficz

series ordinal

2

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25 August 2017

publication date

15 November 2011

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25 August 2017

published in

Nature Reviews Genetics

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25 August 2017

volume

13

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25 August 2017

issue

1

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25 August 2017

page(s)

7-13

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Epigenetic reprogramming in mouse primordial germ cells

25 August 2017

cites work

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The ubiquitin ligase Hyperplastic discs negatively regulates hedgehog and decapentaplegic expression by independent mechanisms

31 March 2020

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Demethylation of the zygotic paternal genome

31 March 2020

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Active demethylation of the paternal genome in the mouse zygote

31 March 2020

1 reference

Conversion of 5-methylcytosine to 5-hydroxymethylcytosine in mammalian DNA by MLL partner TET1

31 March 2020

1 reference

The presence of 5-hydroxymethylcytosine in animal deoxyribonucleic acid

31 March 2020

1 reference

The nuclear DNA base 5-hydroxymethylcytosine is present in Purkinje neurons and the brain

31 March 2020

1 reference

Comparative genomics of transcription factors and chromatin proteins in parasitic protists and other eukaryotes

31 March 2020

1 reference

Prediction of novel families of enzymes involved in oxidative and other complex modifications of bases in nucleic acids

31 March 2020

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Impaired hydroxylation of 5-methylcytosine in myeloid cancers with mutant TET2

31 March 2020

1 reference

Role of Tet proteins in 5mC to 5hmC conversion, ES-cell self-renewal and inner cell mass specification

31 March 2020

1 reference

Dynamic regulation of 5-hydroxymethylcytosine in mouse ES cells and during differentiation

31 March 2020

1 reference

Different binding properties and function of CXXC zinc finger domains in Dnmt1 and Tet1

31 March 2020

1 reference

Genome-wide regulation of 5hmC, 5mC, and gene expression by Tet1 hydroxylase in mouse embryonic stem cells

31 March 2020

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TET1 is a DNA-binding protein that modulates DNA methylation and gene transcription via hydroxylation of 5-methylcytosine

31 March 2020

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Genome-wide reprogramming in the mouse germ line entails the base excision repair pathway

31 March 2020

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5-Hydroxymethylcytosine in the mammalian zygote is linked with epigenetic reprogramming

31 March 2020

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Reprogramming of the paternal genome upon fertilization involves genome-wide oxidation of 5-methylcytosine

31 March 2020

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The role of Tet3 DNA dioxygenase in epigenetic reprogramming by oocytes

31 March 2020

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Tissue distribution of 5-hydroxymethylcytosine and search for active demethylation intermediates

31 March 2020

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The discovery of 5-formylcytosine in embryonic stem cell DNA.

31 March 2020

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Hydroxylation of 5-methylcytosine by TET1 promotes active DNA demethylation in the adult brain

31 March 2020

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Tet-mediated formation of 5-carboxylcytosine and its excision by TDG in mammalian DNA

31 March 2020

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Tet proteins can convert 5-methylcytosine to 5-formylcytosine and 5-carboxylcytosine

31 March 2020

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Active DNA demethylation: many roads lead to Rome.

31 March 2020

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Active DNA demethylation mediated by DNA glycosylases

31 March 2020

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Genome-wide erasure of DNA methylation in mouse primordial germ cells is affected by AID deficiency.

31 March 2020

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Replication-dependent loss of 5-hydroxymethylcytosine in mouse preimplantation embryos

31 March 2020

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Dynamic link of DNA demethylation, DNA strand breaks and repair in mouse zygotes.

31 March 2020

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Endogenous cytosine damage products alter the site selectivity of human DNA maintenance methyltransferase DNMT1.

31 March 2020

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Recognition of 5-hydroxymethylcytosine by the Uhrf1 SRA domain

31 March 2020

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Thymine DNA glycosylase is essential for active DNA demethylation by linked deamination-base excision repair

31 March 2020

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Thymine DNA glycosylase can rapidly excise 5-formylcytosine and 5-carboxylcytosine: potential implications for active demethylation of CpG sites

31 March 2020

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Tet1 and Tet2 regulate 5-hydroxymethylcytosine production and cell lineage specification in mouse embryonic stem cells

31 March 2020

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Dual functions of Tet1 in transcriptional regulation in mouse embryonic stem cells.

31 March 2020

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Genome-wide analysis of 5-hydroxymethylcytosine distribution reveals its dual function in transcriptional regulation in mouse embryonic stem cells.

31 March 2020

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TET1 and hydroxymethylcytosine in transcription and DNA methylation fidelity

31 March 2020

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Genome-wide mapping of 5-hydroxymethylcytosine in embryonic stem cells

31 March 2020

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Integrating 5-hydroxymethylcytosine into the epigenomic landscape of human embryonic stem cells

31 March 2020

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5-Hydroxymethylcytosine is associated with enhancers and gene bodies in human embryonic stem cells

31 March 2020

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Genomic mapping of 5-hydroxymethylcytosine in the human brain

31 March 2020

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Oxidative damage to methyl-CpG sequences inhibits the binding of the methyl-CpG binding domain (MBD) of methyl-CpG binding protein 2 (MeCP2).

31 March 2020

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Tet1 is dispensable for maintaining pluripotency and its loss is compatible with embryonic and postnatal development

31 March 2020

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Ten-Eleven-Translocation 2 (TET2) negatively regulates homeostasis and differentiation of hematopoietic stem cells in mice

31 March 2020

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Deletion of Tet2 in mice leads to dysregulated hematopoietic stem cells and subsequent development of myeloid malignancies

31 March 2020

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TET2 inactivation results in pleiotropic hematopoietic abnormalities in mouse and is a recurrent event during human lymphomagenesis

31 March 2020

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Tet2 loss leads to increased hematopoietic stem cell self-renewal and myeloid transformation

31 March 2020

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Quantification of the sixth DNA base hydroxymethylcytosine in the brain

31 March 2020

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Selective chemical labeling reveals the genome-wide distribution of 5-hydroxymethylcytosine

31 March 2020

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EpiRegNet: constructing epigenetic regulatory network from high throughput gene expression data for humans

31 March 2020

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The behaviour of 5-hydroxymethylcytosine in bisulfite sequencing

31 March 2020

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Direct detection of DNA methylation during single-molecule, real-time sequencing

31 March 2020

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Discrimination of methylcytosine from hydroxymethylcytosine in DNA molecules

31 March 2020

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Tissue-specific distribution and dynamic changes of 5-hydroxymethylcytosine in mammalian genomes

31 March 2020

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Distribution of 5-hydroxymethylcytosine in different human tissues

31 March 2020

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Erasing genomic imprinting memory in mouse clone embryos produced from day 11.5 primordial germ cells.

31 March 2020

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12 December 2020

Hypothesis: environmental regulation of 5-hydroxymethylcytosine by oxidative stress

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12 December 2020

Mitochondria and the death of oocytes

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12 December 2020

Sensitive enzymatic quantification of 5-hydroxymethylcytosine in genomic DNA

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12 December 2020

Identifiers

DOI

10.1038/NRG3080

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release_3d2ise3vo5b5llvmj6newg7ayu

25 August 2017

Fatcat ID

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Fatcat

https://api.fatcat.wiki/v0/release/3d2ise3vo5b5llvmj6newg7ayu

24 November 2022

mapped directly with Wikidata item

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