Apollo: Democratizing genome annotation (Q64256249)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30726205%20AND%20SRC:MED&resulttype=core&format=json

22 April 2020

title

Apollo: Democratizing genome annotation (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30726205%20AND%20SRC:MED&resulttype=core&format=json

22 April 2020

main subject

modeling and simulation

0 references

1 reference

1

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22 April 2020

Deepak R. Unni

2

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22 April 2020

Monica Munoz-Torres

4

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22 April 2020

Nomi L. Harris

5

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30726205%20AND%20SRC:MED&resulttype=core&format=json

22 April 2020

Eric Yao

6

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22 April 2020

Helena Rasche

7

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22 April 2020

Christine G Elsik

9

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22 April 2020

10

Suzanna E Lewis

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22 April 2020

author name string

Colin Diesh

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30726205%20AND%20SRC:MED&resulttype=core&format=json

22 April 2020

Ian H Holmes

8

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22 April 2020

language of work or name

English

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publication date

6 February 2019

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30726205%20AND%20SRC:MED&resulttype=core&format=json

PLOS Computational Biology

22 April 2020

published in

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22 April 2020

volume

15

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22 April 2020

issue

2

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22 April 2020

page(s)

e1006790

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Creative Commons Attribution 4.0 International

22 April 2020

copyright license

start time

6 February 2019

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

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describes a project that uses

Jupyter notebook file

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Apollo: a sequence annotation editor

PubMed Central

cites work

1 reference

12 December 2020

A Chado case study: an ontology-based modular schema for representing genome-associated biological information

1 reference

12 December 2020

Web Apollo: a web-based genomic annotation editing platform

1 reference

12 December 2020

Decoding the massive genome of loblolly pine using haploid DNA and novel assembly strategies

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12 December 2020

The genome sequence and effector complement of the flax rust pathogen Melampsora lini

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12 December 2020

The i5k Workspace@NAL--enabling genomic data access, visualization and curation of arthropod genomes

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12 December 2020

VectorBase: an updated bioinformatics resource for invertebrate vectors and other organisms related with human diseases

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12 December 2020

Xenbase: Core features, data acquisition, and data processing

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12 December 2020

PhytoPath: an integrative resource for plant pathogen genomics.

1 reference

12 December 2020

Genome sequence of the Asian Tiger mosquito, Aedes albopictus, reveals insights into its biology, genetics, and evolution

1 reference

12 December 2020

Hymenoptera Genome Database: integrating genome annotations in HymenopteraMine

1 reference

12 December 2020

Unique features of a global human ectoparasite identified through sequencing of the bed bug genome

1 reference

12 December 2020

Complete mitochondrial genome of the Verticillium-wilt causing plant pathogen Verticillium nonalfalfae

1 reference

12 December 2020

Comprehensive Annotation of the Parastagonospora nodorum Reference Genome Using Next-Generation Genomics, Transcriptomics and Proteogenomics

1 reference

12 December 2020

Global Identification of the Full-Length Transcripts and Alternative Splicing Related to Phenolic Acid Biosynthetic Genes in Salvia miltiorrhiza

1 reference

12 December 2020

JBrowse: a dynamic web platform for genome visualization and analysis

1 reference

12 December 2020

De novo genome assembly of Geosmithia morbida, the causal agent of thousand cankers disease

1 reference

12 December 2020

The genome of the yellow potato cyst nematode, Globodera rostochiensis, reveals insights into the basis of parasitism and virulence.

1 reference

12 December 2020

Genome Sequence of the Edible Cultivated Mushroom Lentinula edodes (Shiitake) Reveals Insights into Lignocellulose Degradation

1 reference

12 December 2020

Navigating the Phenotype Frontier: The Monarch Initiative

1 reference

12 December 2020

Annotated draft genome sequences of three species of Cryptosporidium: Cryptosporidium meleagridis isolate UKMEL1, C. baileyi isolate TAMU-09Q1 and C. hominis isolates TU502_2012 and UKH1.

1 reference

12 December 2020

Multifaceted biological insights from a draft genome sequence of the tobacco hornworm moth, Manduca sexta.

1 reference

12 December 2020

The whole genome sequence of the Mediterranean fruit fly, Ceratitis capitata (Wiedemann), reveals insights into the biology and adaptive evolution of a highly invasive pest species

1 reference

12 December 2020

Genome of the Asian longhorned beetle (Anoplophora glabripennis), a globally significant invasive species, reveals key functional and evolutionary innovations at the beetle-plant interface

1 reference

12 December 2020

The Human Phenotype Ontology in 2017

1 reference

12 December 2020

Cryptosporidium hominis gene catalog: a resource for the selection of novel Cryptosporidium vaccine candidates

1 reference

12 December 2020

Proteogenomics produces comprehensive and highly accurate protein-coding gene annotation in a complete genome assembly of Malassezia sympodialis

1 reference

12 December 2020

Two genomes of highly polyphagous lepidopteran pests (Spodoptera frugiperda, Noctuidae) with different host-plant ranges.

1 reference

12 December 2020

Genome re-annotation of the wild strawberry Fragaria vesca using extensive Illumina- and SMRT-based RNA-seq datasets

1 reference

12 December 2020

WormBase 2017: molting into a new stage.

1 reference

12 December 2020

Mouse Genome Database (MGD)-2018: knowledgebase for the laboratory mouse

1 reference

12 December 2020

Echinobase: an expanding resource for echinoderm genomic information

1 reference

12 December 2020

The sea lamprey germline genome provides insights into programmed genome rearrangement and vertebrate evolution.

1 reference

12 December 2020

The genome of the Hi5 germ cell line from Trichoplusia ni, an agricultural pest and novel model for small RNA biology

1 reference

12 December 2020

A model species for agricultural pest genomics: the genome of the Colorado potato beetle, Leptinotarsa decemlineata (Coleoptera: Chrysomelidae).

1 reference

12 December 2020

Genetic Basis of Body Color and Spotting Pattern in Redheaded Pine Sawfly Larvae (Neodiprion lecontei).

1 reference

12 December 2020

Draft genome assembly of the Bengalese finch, Lonchura striata domestica, a model for motor skill variability and learning.

1 reference

12 December 2020

The Toxicogenome of Hyalella azteca: A Model for Sediment Ecotoxicology and Evolutionary Toxicology.

1 reference

12 December 2020

A manually annotated Actinidia chinensis var. chinensis (kiwifruit) genome highlights the challenges associated with draft genomes and gene prediction in plants.

1 reference

12 December 2020

Whole-genome de novo sequencing reveals unique genes that contributed to the adaptive evolution of the Mikado pheasant.

1 reference

12 December 2020

Signatures of host specialization and a recent transposable element burst in the dynamic one-speed genome of the fungal barley powdery mildew pathogen.

1 reference

12 December 2020

The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2018 update.

1 reference

12 December 2020

10.1371/JOURNAL.PCBI.1006790

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30726205%20AND%20SRC:MED&resulttype=core&format=json

journals/ploscb/DunnUDMHYRHEL19

22 April 2020

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30726205%20AND%20SRC:MED&resulttype=core&format=json

22 April 2020

PubMed publication ID

30726205

1 reference